Ll_transcript_378211

• Id Trinity: TRINITY_DN50769_c2_g2_i6
• Name Transcript: Ll_transcript_378211
• Sequence: CACAGAATAAACTAACTGCTATCTCTTCTTAAACTTCTATAATAAAAACTGTATCATTTTCGATCATCACAAACAACATTTCACATTACGCGCTTTCTCT CTCTCTCTCTCTCCAATTTCCTTCACTTCACTCTGTATTTTCATTCTCCCAGCCTTCAACAATGTTTATGGTGAAGAAGCTAGTGGAGAAAGCTTCCGTA AAGAAGCAACCTAGTGGAAATTCACCAGATGGGTTAAAAGCTACTGATATAAATCCACGCCTGGTTTTTCATCAAGGGGTACCATCACGTGGTTCCAAGT TTGCCTATGACAACATTCACAAAATACTGGCTCTTTCTACCAAGGATGGACGTATTAAACTATTTGGAAAAGATAATACACAAGCACTACTTGAATCTAG TGAGCCTAGCAAGTTTTTACAGTTCATCCAGAACCAAGGAGTCCTTATAAATGTCACTTTCAATAACCACATTGAGGTGTGGGACATAGATAAGAAGCTG TTGTCTGATACGTATGTTGTTAAACAAGATATCACTTCCTTTGCAGTCATTGAACAGACCCTATATATGTATGTTGGAGTTTCTAATGGTAATATTTCAG TTCTGAAGCTTGATCAAGAACCATGGCATATAGGACAGATGAAATACACCATACCACTCTCAGCTTCTTATGGGAATTCAACTGAAGTGTCTGACAACAA TACTGCTGTGACACACATACTTCCTCAACCAGCAGCTGAAAGTAAGAGAGCTCTCATCATCTTTAGAAATGGCCAAATTGTATTATGGGATGTTCGAGAA AGCAAATCAATTTTCAGAACTGGTGGAAATATATTGCAGCCACTGCATAATGAAACAAAGGTGTCTTCTGCATGTTGGGTGTGTCCTTTTGGAACTAAAG TGGTTGTAGGGTACAGCAATGGAGAGCTCTTCATTTGGGGCATTCCTTCTTTAAACACAGGGCATGGTTCAACACCTGATTATAGTATCCAGAGCACTCC TATATTAAAACTTAACTTAGGATATAAAACAGACAAAACTTCCATAGGATCAGTAAAATGGAATTATGCTGAAGGAAAGGCTAGTCGGCTATATGTCATG GGAGCGTCTGATAACGCATCTTCAAACTTGACACAGGTAGTTTTGTTGAATGAACACAACGAATCACGTACAGTTAAGTTGGGACTTCATTTGTCTGAAA GTTGTATTGACATGGAGATCATTTCAGCCTCAAGTGAGCAAAGCAAGAATAAACAAAATTCTGTTTTCCTTTTGCTTGGGAAATCAGGCCATTTATATAT GTATGATGATAGTTTGATTGAAAGGTATCTACTGCAGTTGCAGTCTAAGTCCACAGCCTCACCACCGAAGGAAGTGGTTGTGAAGTTACCACTGATAGAT TCAAGCATCACAACAACAAAATTCATATCCAACAATTCAAGCTTTTTAAATTCTGGAGAACAGTATTACAGCCAGCTGATGGAAACTTATCCACCGCTTA TTCCCATTGACACAAGTCTCAAAGTTGGGTTTAACCTCAGTTCTGCCAACTTTGCTGGATTTTCAAATGTTAAAAACTTGTACATAACTGGACATGGCAA TGGAGCCATAACTTTTTGGGATGCATCATGTCCCATTTTCACCCCAGTTTTACAATTAAAGCAACAGAGTGAAAATGATTTTTCTTTAAGTGGTATACCC TTGACGGCATTATATTTTGATATCAACTCTCCTCTCCTTGTTTCTGGTGACCAAAGTGGAATGGTTCGCATCTTCAAGTTCAAACCAGAACCATATGCCT CCAGCTTCTTGTCACTTGCTGGAGTTACAAAGAAAGGGCCAGATCATATAGTCCAAAGTGTTAAACTTATAAAGACTAGTGGTGCTGTGATTTGTATGAA CATAGATCCCCTCTCAGGGCATCTTGCTGTTGGTTCTGAACAAGGAAATGTTTCAGTTATTGACATAGATGGCCCGTCTCTGTTATATCAGAAACATATC ACGAGTCAAATTTCTACCGGTATCATCTCTCTGCGGTTCATAACCTGCAGATTGAATGGTTTTGATAAAAACATTTTAGCAGTTGGGACAAAGGATTCAT CCATTCTGGCACTAGATAACGAAACTGGAAACACACTTAGCACTGAAACTGTTCATCCTATGAAGCCCTCCAAAGCTCTCTTCATGCAAGTATTGGATGG ACAAGGTGAACCAATCACACGATCAGTTACAAAAGATAGCTTAGACTTAAGAGAAGGGAATCATATTGAGGATGCAAGAACAAAGCAACTGTACGTTTTG CAGTGTTCTGAGAAGGCTCTGTATATCTATTCTTTAGTGCATGTTGTACAGGGAGTCAAGAAGGTGCTTCATAAAAAGAAGTTTAATTCCTCTTCCTGTT GTTGGGCATCAACATTTTATACCCCCTCTAATATTGGCCTCATACTACTTTTCACCAGTGGAAAAGTAGAATTAAGGTCTTTACCAGAATTATCTCTGAT AGCGGAGACTTCAATTAGAGGTTTCACTTACTCGCCTCCAAAGTTGAAGTCATTTTCTGAGAGCCAGATCTGTTGTTCATCTAGAGGAGATCTTGTTTTG TTGAATGGTGACCAGGAAATCTTTGTTGTCTCATTGTTGGTCCAGAGGAATACTTACAGGCTTTTGGACTCTATTAGCTCCGTCTACAAGAAAGACAGAA GGCTATCACAAGAAGAGCTTGTTCCTGGCCCGGTCATCATTCCTAAGGAAAAGAAAAAGGGTATATTCGGCTCCGTAATCAAAGATTTTACTGGCAGTAA AGAAAAGCATGTGCTTCTCGTGGAAAAAGAAGATGACAAAGAAAGTTTCGAGGAACTCTCGACAATCTTTTCCTATGCAAATTTTCCAAATGATGCTGAC AATGACGATATCTCGACTGTGGACGAAGATGAGCTTGAACTAAACATAGATGACATTGACCTAGAAGATCCTGTGGAAAAACATAAAGGACAAAGCATAT TGGGGGCTCTCAATAAGAAGAATTTGGCTGGCACATTTCAGGCTATGAAAGGAAGAATGAAAGTGATGAAGGGCAACAACCAGAAAGCACCTGAGAAGGA AGAACAACAAGAGGAGAAAGCTGGTTCACTCCACCAAATTAAGAAGAGATATGGATTTTCTTCTTCCTCCAATGAAATAGGCACTGCTAAACTGGTAGAA AGCAAGCTGCAGGATAACACTAGGAAATTGCAGGGCATCAACCTACGAGCTGCTGAGATGAGTGATAAAGCAAAATCATTTTCAACATTGGCCAAACAAG TGCTGAAAAGTACTGAGCGGGATAGAAGAAGTTCATAACACATTAACCAATTACAATTTGCATTTTTAAATTGTTTTTTTATCACATATATATTATTTTT AATATATTTTTATATGTCAGTTTGTTCACCACCATTTTGTATTTAATATATACTTTTTCAAGCTGGCAGCAATGCTGAGATGCTGCCTGATTGCTTTTGT TTTGGATTGATGTAATTTTCCTGTAATCATGTCATATAGATTGGATATATAGTTTTTTCCCTATCTTTTTACTTG
• Tissue: pods
• Gene name: LI_gene_179768;
• Additional information: details;

Expression of Ll_transcript_378211

FPKM

• PAB: 12.4
• PNAB: 2.4
• PS1: 1.6
• PS2: 1.2
• PS3: 1.3
• PW1: 2
• PW2: 1.8
• PW3: 3.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378211

• Blastp: Syntaxin-binding protein 5 from Homo with 25.75% of identity
• Blastx: Syntaxin-binding protein 5 from Homo with 25.64% of identity
• Eggnog: syntaxin binding protein(ENOG410XTER)
• Kegg: Link to kegg annotations (134957)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423912.1)
• Pfam: Lethal giant larvae(Lgl) like, C-terminal (PF08596.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;