| Id Trinity | TRINITY_DN50769_c2_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_378214 |
| Sequence | CACAGAATAAACTAACTGCTATCTCTTCTTAAACTTCTATAATAAAAACTGTATCATTTTCGATCATCACAAACAACATTTCACATTACGCGCTTTCTCT CTCTCTCTCTCTCCAATTTCCTTCACTTCACTCTGTATTTTCATTCTCCCAGCCTTCAACAATGTTTATGGTGAAGAAGCTAGTGGAGAAAGCTTCCGTA AAGAAGCAACCTAGTGGAAATTCACCAGATGGGTTAAAAGCTACTGATATAAATCCACGCCTGGTTTTTCATCAAGGGGTACCATCACGTGGTTCCAAGT TTGCCTATGACAACATTCACAAAATACTGGCTCTTTCTACCAAGGATGGACGTATTAAACTATTTGGAAAAGATAATACACAAGCACTACTTGAATCTAG TGAGCCTAGCAAGTTTTTACAGTTCATCCAGAACCAAGGAGTCCTTATAAATGTCACTTTCAATAACCACATTGAGGTGTGGGACATAGATAAGAAGCTG TTGTCTGATACGTATGTTGTTAAACAAGATATCACTTCCTTTGCAGTCATTGAACAGACCCTATATATGTATGTTGGAGTTTCTAATGGTAATATTTCAG TTCTGAAGCTTGATCAAGAACCATGGCATATAGGACAGATGAAATACACCATACCACTCTCAGCTTCTTATGGGAATTCAACTGAAGTGTCTGACAACAA TACTGCTGTGACACACATACTTCCTCAACCAGCAGCTGAAAGTAAGAGAGCTCTCATCATCTTTAGAAATGGCCAAATTGTATTATGGGATGTTCGAGAA AGCAAATCAATTTTCAGAACTGGTGGAAATATATTGCAGCCACTGCATAATGAAACAAAGGTGTCTTCTGCATGTTGGGTGTGTCCTTTTGGAACTAAAG TGGTTGTAGGGTACAGCAATGGAGAGCTCTTCATTTGGGGCATTCCTTCTTTAAACACAGGGCATGGTTCAACACCTGATTATAGTATCCAGAGCACTCC TATATTAAAACTTAACTTAGGATATAAAACAGACAAAACTTCCATAGGATCAGTAAAATGGAATTATGCTGAAGGAAAGGCTAGTCGGCTATATGTCATG GGAGCGTCTGATAACGCATCTTCAAACTTGACACAGGTAGTTTTGTTGAATGAACACAACGAATCACGTACAGTTAAGTTGGGACTTCATTTGTCTGAAA GTTGTATTGACATGGAGATCATTTCAGCCTCAAGTGAGCAAAGCAAGAATAAACAAAATTCTGTTTTCCTTTTGCTTGGGAAATCAGGCCATTTATATAT GTATGATGATAGTTTGATTGAAAGGTATCTACTGCAGTTGCAGTCTAAGTCCACAGCCTCACCACCGAAGGAAGTGGTTGTGAAGTTACCACTGATAGAT TCAAGCATCACAACAACAAAATTCATATCCAACAATTCAAGCTTTTTAAATTCTGGAGAACAGTATTACAGCCAGCTGATGGAAACTTATCCACCGCTTA TTCCCATTGACACAAGTCTCAAAGTTGGGTTTAACCTCAGTTCTGCCAACTTTGCTGGATTTTCAAATGTTAAAAACTTGTACATAACTGGACATGGCAA TGGAGCCATAACTTTTTGGGATGCATCATGTCCCATTTTCACCCCAGTTTTACAATTAAAGCAACAGAGTGAAAATGATTTTTCTTTAAGTGGTATACCC TTGACGGCATTATATTTTGATATCAACTCTCCTCTCCTTGTTTCTGGTGACCAAAGTGGAATGGTGAGGTTCATTCAATTATGAATTAGGTTCGCATCTT CAAGTTCAAACCAGAACCATATGCCTCCAGCTTCTTGTCACTTGCTGGAGTTACAAAGAAAGGGCCAGATCATATAGTCCAAAGTGTTAAACTTATAAAG ACTAGTGGTGCTGTGATTTGTATGAACATAGATCCCCTCTCAGGGCATCTTGCTGTTGGTTCTGAACAAGGAAATGTTTCAGTTATTGACATAGATGGCC CGTCTCTGTTATATCAGAAACATATCACGAGTCAAATTTCTACCGGTATCATCTCTCTGCGGTTCATAACCTGCAGATTGAATGGTTTTGATAAAAACAT TTTAGCAGTTGGGACAAAGGATTCATCCATTCTGGCACTAGATAACGAAACTGGAAACACACTTAGCACTGAAACTGTTCATCCTATGAAGCCCTCCAAA GCTCTCTTCATGCAAGTATTGGATGGACAAGGTGAACCAATCACACGATCAGTTACAAAAGATAGCTTAGACTTAAGAGAAGGGAATCATATTGAGGATG CAAGAACAAAGCAACTGTACGTTTTGCAGTGTTCTGAGAAGGCTCTGTATATCTATTCTTTAGTGCATGTTGTACAGGGAGTCAAGAAGGTGCTTCATAA AAAGAAGTTTAATTCCTCTTCCTGTTGTTGGGCATCAACATTTTATACCCCCTCTAATATTGGCCTCATACTACTTTTCACCAGTGGAAAAGTAGAATTA AGGTCTTTACCAGAATTATCTCTGATAGCGGAGACTTCAATTAGAGGTTTCACTTACTCGCCTCCAAAGTTGAAGTCATTTTCTGAGAGCCAGATCTGTT GTTCATCTAGAGGAGATCTTGTTTTGTTGAATGGTGACCAGGAAATCTTTGTTGTCTCATTGTTGGTCCAGAGGAATACTTACAGGCTTTTGGACTCTAT TAGCTCCGTCTACAAGAAAGACAGAAGGCTATCACAAGAAGAGCTTGTTCCTGGCCCGGTCATCATTCCTAAGGAAAAGAAAAAGGGTATATTCGGCTCC GTAATCAAAGATTTTACTGGCAGTAAAGAAAAGCATGTGCTTCTCGTGGAAAAAGAAGATGACAAAGAAAGTTTCGAGGAACTCTCGACAATCTTTTCCT ATGCAAATTTTCCAAATGATGCTGACAATGACGATATCTCGACTGTGGACGAAGATGAGCTTGAACTAAACATAGATGACATTGACCTAGAAGATCCTGT GGAAAAACATAAAGGACAAAGCATATTGGGGGCTCTCAATAAGAAGAATTTGGCTGGCACATTTCAGGCTATGAAAGGAAGAATGAAAGTGATGAAGGGC AACAACCAGAAAGCACCTGAGAAGGAAGAACAACAAGAGGAGAAAGCTGGTTCACTCCACCAAATTAAGAAGAGATATGGATTTTCTTCTTCCTCCAATG AAATAGGCACTGCTAAACTGGTAGAAAGCAAGCTGCAGGATAACACTAGGAAATTGCAGGGCATCAACCTACGAGCTGCTGAGATGAGTGATAAAGCAAA ATCATTTTCAACATTGGCCAAACAAGTGCTGAAAAGTACTGAGCGGGATAGAAGAAGTTCATAACACATTAACCAATTACAATTTGCATTTTTAAATTGT TTTTTTATCACATATATATTATTTTTAATATATTTTTATATGTCAGTTTGTTCACCACCATTTTGTATTTAATATATACTTTTTCAAGCTGGCAGCAATG CTGAGATGCTGCCTGATTGCTTTTGTTTTGGATTGATGTAATTTTCCTGTAATCATGTCATATAGATTGGATATATAGTTTTTTCCCTATCTTTTTACTT G BLAST |
| Tissue | pods |
| Gene name | LI_gene_179768; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378214
| Blastp | - |
|---|---|
| Blastx | Syntaxin-binding protein 5 from Homo with 25.64% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423912.1) |
| Pfam | Lethal giant larvae(Lgl) like, C-terminal (PF08596.9) |
| Rfam | - |
| GO | - |