| Id Trinity | TRINITY_DN50769_c2_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_378205 |
| Sequence | AGAACTGTTCTTATTTATAAACAAAAATAAAGAAATAAGAACAATACAGTGAAAAAAATAAAGTAAAAATATTCTTATTCCGGTCCGAATAAGTTTAAGA ATAACAATTCTCTAACCCACTTGGTTTGTCTTTTCCATAATGTACTGTCCAAAGTAAGAAACTGCAATCATAATTCAACTATTCTCTCTCTCTCTGTTTC TAAGTTTCAGATCCTGTAACAATGTTTGTGAAGAAGCTAGTAGAGAAAGCTTCTATAATCAAGCCTAGTGGAAATTCATTAGATGGGTTAAAAGCTAGTG ATGTAGATCCACATTTGATATTTCATCAAGGGGTACCTTCAGGTTCTACCAAATTTGCCTATGACACCATTCAGAAGATTCTCTCTCTTTCTACAAAAGA TGGCCGGATTAAACTATTCGGAGAAGATAATGGCCAAGCCTTACTTGAATCCAGTGAAACAGTTCCTAGCAAGTTCTTGCAGTTCATCCAGAACCAAGGT ATCCTTATAAATGTCACCTCCAATAATCATATTGAGGTTTGGGACATAGACAAGAAACTATTGTCTGACGTGTACGTTGTTAAAGAAGAAATCGCTTCCT TCGCCGTCATTCACCATAGCCTATACATGTATATTGGAGATTCTATTGGTAATATTTCAGTTTTGAAGCTTGATCGCGAACCGTGGAAAATAGTACACAT GAAATACACCATACCCCTGTCAGCTTCCTATGGGAATTCGGAAGTGTCGGATGATACTGCGGTGACACATATACTGCCTCAACCAGCAGCCGAAAGTAGG AGGGTTCTCATAATCTTTAGAAATGGCCAAATAGTATTATGGGATATTCGAGAGAGCAGATCTGTTTTCAGAACTGGTGGAAATATGTCACAACCACTGT ATAATGAAACAAAGAAAGTAACTTGTGCGTGTTGGGCATGTCCTTTCGGAAGTAAAGTGGTTGTCGGGTACAACAATGGAGAGCTCTTCATTTGGAGCAT TGCTTCTGTAAACATAGGAAATGGTTCAGCATCTGATTGTAGTAGCCAAAACACTCCTTTGCTCAAACTTAACTTAGGATATAAGTCCGACAAAATTTCC ATCGGATCAATTAAATGGGTTTATGCCGAAGGAAAGGCTAGCCGACTCTATGTCATGGGAGCTTCTGACAATGCATCTTCAAACTTGTTGCAGGTGGCGT TGTTGAATGAGCTTACGGAATCTCGCACAATAAAGTTGGGATTTCATTTGCCTGAATGTTGCATTGACACGGAGATAATATCAACTTCGAGTGAGCAAAG CAAGCATCAGCATGATTTTTTACTTATGCTCGGGAAGTCAGGCCATATATACCAATATGATGATAGTTTGATCGAAAAGTACCTTCTACAGAGTCAGTCT AAGTCCACGCCCTCAATTCCGAAGGAAGTCGTTGTGAAGATCCCGTTGACAGATTCAAGCATCACAACAGCAAAATTCATCTCCAACAATCCCAGTGAGT TAAACTCTAATGAGGAGTATTACAGACAGCTGGTCAAAAATCATCCACTACTTATTCCTGCTGAGACAATCCAAAGAGAAGGGACTAGCCCGAGTTCTGC CAAATTTACGGGATTTTCGAAAGTTCAAAACTTGTACATAACTGGACATAGCAATGGAGCCATAAACTTCTGGGATGCTTCTTGTCCCTTTTTCACCTCA ATTTTACAGTTAAGGCAACAGAGCGAAAATGACTTTTCTTTAAGTGGCATACCCGTGACGGCATTATATTTTGATTGCAACTCTCCTCTTCTTGTTTCTG GTGACCAAAGCGGAACGGTTCGCGTCTTTAGATTCAAACCTGAACCATACGCTACGAACAGCTTCATGTCGCTTACCGGTGGTACAAAGAAAGGGAATGA TCATATAATCCACAGTGTGAAACTTGTAAAGATTAATGGTGCCATAATTTCTATGAACATAAATCACTGCTCAACACATCTTGCTGTTGGTTCTGATCAA GGACATGTTTCAGTTTTTAACATAGATGACCTCACTTTAATATATCAGAAGCATATTCCAAGTGAAATTTCAGCTGGTATCATCTCTCTGCAGTTCCAAA TCTGCAAGTTGCATGGTTTCGAGAAAAACATTTTAGCAGTCGGAACAAAGGACTCGTCTTTTCTTGCACTCGATAGCGAAACCGGAAACACGCTGAGCTC TGGAACTGTTCATCCTAAGAAGCCCTCTAAAGCTCTATTGATGCAGGTGTTGGATGGACAAGGTGAATCAATTACTAAAGATGGAATAGACTTAAGAGAA GGACTTCATAATGAGGATTCAACAACAAAGCAATTGTACATTCTGCTTTGTTCTGAGAAAGCTTTATATGTGTATTCATTAGTGCATGCTGTTCAGGGAA TTAAAAAGGTACTTCACAAGAAGTTTCATTCCTCTTCATGTTGTTGGGCATCAATATTTTATGGTCCCTCTCATATTGGCCTTGTGCTCCTTTTCACTAA TGGACAAGTAGAATTAAGGTCTTTGCCAGAGTTATCACTTATTGTGGAGACTTCAATTAGAGGTTTCACTTATTCACCTCCAACATTGAACTCATTTTCT GACAGCAACATATGTTGTTCATCCAAAGGAGATATTGTTTTGGTATGATCATGTTATTTTTCCTAGTACAAGTTTCTGTAAATGTTTGATTTTGAGTTAA CTAAATTTCCATTCATAGGTGAATGGTGACCAAGAAATTTTTGTCATCTCTTTGTTGGTCCAAAGGAATATTTTCAGGTATATAATATACCAATATATAT ATATATATCTTACTATACATAAAGTTTCTGCATGGCTATTGGAAATAATATCCTCACATGGAAAGGTTGTTAGACCCGACCATGAACGGGGAACCTCCAA CCACCACAGAGTTTCATTGTTAACGGGACATGAGAAGAGTGAGAGCCACAAGTGAAACATCATGTCTTGATCCACGAGTATTTTCCACTTATAAACTCTT TCATTTCTCCCTTCATATCCAATGCACTCCACACTTGAATAAACCCAACAATCTCCTCTTCAAGTGTGAGTACTAGACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_179769; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378205
| Blastp | Syntaxin-binding protein 5 from Homo with 23.81% of identity |
|---|---|
| Blastx | Syntaxin-binding protein 5 from Homo with 23.81% of identity |
| Eggnog | syntaxin binding protein(ENOG410XTER) |
| Kegg | Link to kegg annotations (134957) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446907.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |