Ll_transcript_378216

• Id Trinity: TRINITY_DN50769_c2_g3_i5
• Name Transcript: Ll_transcript_378216
• Sequence: AGAACTGTTCTTATTTATAAACAAAAATAAAGAAATAAGAACAATACAGTGAAAAAAATAAAGTAAAAATATTCTTATTCCGGTCCGAATAAGTTTAAGA ATAACAATTCTCTAACCCACTTGGTTTGTCTTTTCCATAATGTACTGTCCAAAGTAAGAAACTGCAATCATAATTCAACTATTCTCTCTCTCTCTGTTTC TAAGTTTCAGATCCTGTAACAATGTTTGTGAAGAAGCTAGTAGAGAAAGCTTCTATAATCAAGCCTAGTGGAAATTCATTAGATGGGTTAAAAGCTAGTG ATGTAGATCCACATTTGATATTTCATCAAGGGGTACCTTCAGGTTCTACCAAATTTGCCTATGACACCATTCAGAAGATTCTCTCTCTTTCTACAAAAGA TGGCCGGATTAAACTATTCGGAGAAGATAATGGCCAAGCCTTACTTGAATCCAGTGAAACAGTTCCTAGCAAGTTCTTGCAGTTCATCCAGAACCAAGGT ATCCTTATAAATGTCACCTCCAATAATCATATTGAGGTTTGGGACATAGACAAGAAACTATTGTCTGACGTGTACGTTGTTAAAGAAGAAATCGCTTCCT TCGCCGTCATTCACCATAGCCTATACATGTATATTGGAGATTCTATTGGTAATATTTCAGTTTTGAAGCTTGATCGCGAACCGTGGAAAATAGTACACAT GAAATACACCATACCCCTGTCAGCTTCCTATGGGAATTCGGAAGTGTCGGATGATACTGCGGTGACACATATACTGCCTCAACCAGCAGCCGAAAGTAGG AGGGTTCTCATAATCTTTAGAAATGGCCAAATAGTATTATGGGATATTCGAGAGAGCAGATCTGTTTTCAGAACTGGTGGAAATATGTCACAACCACTGT ATAATGAAACAAAGAAAGTAACTTGTGCGTGTTGGGCATGTCCTTTCGGAAGTAAAGTGGTTGTCGGGTACAACAATGGAGAGCTCTTCATTTGGAGCAT TGCTTCTGTAAACATAGGAAATGGTTCAGCATCTGATTGTAGTAGCCAAAACACTCCTTTGCTCAAACTTAACTTAGGATATAAGTCCGACAAAATTTCC ATCGGATCAATTAAATGGGTTTATGCCGAAGGAAAGGCTAGCCGACTCTATGTCATGGGAGCTTCTGACAATGCATCTTCAAACTTGTTGCAGGTGGCGT TGTTGAATGAGCTTACGGAATCTCGCACAATAAAGTTGGGATTTCATTTGCCTGAATGTTGCATTGACACGGAGATAATATCAACTTCGAGTGAGCAAAG CAAGCATCAGCATGATTTTTTACTTATGCTCGGGAAGTCAGGCCATATATACCAATATGATGATAGTTTGATCGAAAAGTACCTTCTACAGAGTCAGTCT AAGTCCACGCCCTCAATTCCGAAGGAAGTCGTTGTGAAGATCCCGTTGACAGATTCAAGCATCACAACAGCAAAATTCATCTCCAACAATCCCAGTGAGT TAAACTCTAATGAGGAGTATTACAGACAGCTGGTCAAAAATCATCCACTACTTATTCCTGCTGAGACAATCCAAAGAGAAGGGACTAGCCCGAGTTCTGC CAAATTTACGGGATTTTCGAAAGTTCAAAACTTGTACATAACTGGACATAGCAATGGAGCCATAAACTTCTGGGATGCTTCTTGTCCCTTTTTCACCTCA ATTTTACAGTTAAGGCAACAGAGCGAAAATGACTTTTCTTTAAGTGGCATACCCGTGACGGCATTATATTTTGATTGCAACTCTCCTCTTCTTGTTTCTG GTGACCAAAGCGGAACGGTTCGCGTCTTTAGATTCAAACCTGAACCATACGCTACGAACAGCTTCATGTCGCTTACCGGTGGTACAAAGAAAGGGAATGA TCATATAATCCACAGTGTGAAACTTGTAAAGATTAATGGTGCCATAATTTCTATGAACATAAATCACTGCTCAACACATCTTGCTGTTGGTTCTGATCAA GGACATGTTTCAGTTTTTAACATAGATGACCTCACTTTAATATATCAGAAGCATATTCCAAGTGAAATTTCAGCTGGTATCATCTCTCTGCAGTTCCAAA TCTGCAAGTTGCATGGTTTCGAGAAAAACATTTTAGCAGTCGGAACAAAGGACTCGTCTTTTCTTGCACTCGATAGCGAAACCGGAAACACGCTGAGCTC TGGAACTGTTCATCCTAAGAAGCCCTCTAAAGCTCTATTGATGCAGGTGTTGGATGGACAAGGTGAATCAATTACTAAAGATGGAATAGACTTAAGAGAA GGACTTCATAATGAGGATTCAACAACAAAGCAATTGTACATTCTGCTTTGTTCTGAGAAAGCTTTATATGTGTATTCATTAGTGCATGCTGTTCAGGGAA TTAAAAAGGTACTTCACAAGAAGTTTCATTCCTCTTCATGTTGTTGGGCATCAATATTTTATGGTCCCTCTCATATTGGCCTTGTGCTCCTTTTCACTAA TGGACAAGTAGAATTAAGGTCTTTGCCAGAGTTATCACTTATTGTGGAGACTTCAATTAGAGGTTTCACTTATTCACCTCCAACATTGAACTCATTTTCT GACAGCAACATATGTTGTTCATCCAAAGGAGATATTGTTTTGGTGAATGGTGACCAAGAAATTTTTGTCATCTCTTTGTTGGTCCAAAGGAATATTTTCA GGCATTTGAACACTGCTAGCTGCATCTACAAGAAAGAAAAAATGGTTTCGGATGAAGAGCTTGTCCATGACCCGGTCGTTCATAAGGAAAAGAAAAAGGG TATATTCAGCTCCATTATCAAAGATATTACCGGCAGTAAAGAAAAGCATGTGCCCGTCGTGGAACCGGAAGACTCTAAAGAAAGTATCCAAGAACTGTCA CTGATCTTTTCAAATGAAAATTTTCCATGTGATGCTGATAATAATGAGAGCCTGATAGTTGATGAAGAAGAGCTTGAATTAAACATAGACGACATTGATC TCGATGACGATGAAGGAAAACACAAAGAACATAGCATATTGGGAGGTCTTAGTAAGAAGAAATTGGCTGGAAAATTTCAGGCTTTAAAAGGAAAATTTAA AGAACTGAAGGGCAACAATCAGAAAACATCCGATAAGGAAGAGCAACATGACGATCAAGCTGGATCGGTCGATCAAATTAAGAAGAAATATGGGTTTTCT TCTTCTTCTTCTTCTTCCACTGAAACAAGTGTTGCAAAATTGGCAGAAAACAAGTTGCAAGAGAATGTTAACAGATTGCAGGGTATCAACCTTAGAACAA CAGAAATGGAAGATACAGCAAAGTCATTTTCAGCATTGGCAAATCAGGTGCTTAGAAAAGCTGAAGAGGGTAGACAAAGTTGATAAGACCATTGTTATTA GAACCGGACCGAACTAGACGGTCCGGCCGGTTGGACCGCTGACCGGACTTAAAAACGGTTCTGGTTTTGTGGCTTAAACAAGTGAGAGTTAGACCGCTTT GAACCGGGGAAATAATGGTCCGGTTTGACGTTCGGTTCGGGTTTCATAACATTGGATATCACCTATAAAAATATTGATTACACTTTATATTATAAACTTT TTATACTTAAATTTTGGATTGATATCAAGTGCTTCAATTGTCCAAATTATTACATATTCAATAGATTTTATTGCACAAAAAATTGATACATGCACATTTT ATCAATATGTAAAGAGAAAAACTTATGTAGAAAGATATCTAGCAAATCAAATGAATCAAACATTATT
• Tissue: pods
• Gene name: LI_gene_179769;
• Additional information: details;

Expression of Ll_transcript_378216

FPKM

• PAB: 0.2
• PNAB: 10.4
• PS1: 11.1
• PS2: 5.1
• PS3: 7.9
• PW1: 10.5
• PW2: 4.7
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378216

• Blastp: Syntaxin-binding protein 5 from Homo with 23.81% of identity
• Blastx: Syntaxin-binding protein 5 from Homo with 23.81% of identity
• Eggnog: syntaxin binding protein(ENOG410XTER)
• Kegg: Link to kegg annotations (134957)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446907.1)
• Pfam: Lethal giant larvae(Lgl) like, C-terminal (PF08596.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;