Ll_transcript_378931

• Id Trinity: TRINITY_DN50770_c0_g1_i2
• Name Transcript: Ll_transcript_378931
• Sequence: CTCTTTTCTTGTGTGCGTTGTTTTGCTTTGTTCCATTCCCAACACTGTTCCGAAAGGGTTAAAGGCTTCACCGTTTTGGCCTCCTCTTTTCTCTTCTAAT TCTTCGCATTCGTTTTCTCATTCTCCTTCTTCTTCATTTCGCACACACACTCTCTCTCTCTCACAACGTGTTCTTCGTTTATCACCAGCACAATTAAACC AGGTGTGTGCCAACCTTCAAGCTACCCATGTGGTTTTAACATTGTCTTTCGTATTGGGTGAAATCTGATTAAAGAGCTATGCAGAGCGATACTAGTACTA GTGCCCCTCCAACTTCTGGTGGTCGGATTAGGCACCGAAAACGTTCATCTGAGGTCATTCCGGAAGATAGCAAAGCAAATGGAACCCGGTTACTTGTTAA TGACAAAAGCAAATATAAGTCCATGATAATTCGTGCATATTCATCCATTTGGATGATTGGGGGCTTTGTGTTAATCATCTATATGGGTCATCTCTATATT ACAGCGATGGTTGTTGTAATCCAAATCTTCATGGCAAAAGAGCTTTTCAATCTACTCAGGAGAGCTCATGAAGATAGACAGCTGCCAGGATTTAGGCTAT TAAATTGGCATTTTTTCTTCACTGCAATGTTATTTGTTTATGGACGTACTCTGAGTCCACGCCTGGTTAACACAGTTACTTCAGACATGGTTTTATATCG GCTAGTGAGCAGTCTTATAAAGTATCATATGGTTATCTGCTACTCCCTGTACATTGCAGCATTCATGTGGTTCATTCTCACATTAAAGAAGAAGATGTAT AAGTACCAATTTGGTCAGTATGCTTGGACACATATGATTCTGATTGTTGTATTTGGGCAGTCCTCCTTTGCCGTGGCAAGCATTTTTGAAGGGATTTTCT GGTAATATAACCTACTAAAGGAAATAATGATTACCTTACCATTGCTAAAAAACATATTTGGCTGTCTTTTAGGTTCCTCTTTAGCATGATATCATATTTA ACTGCACTGTTCCTTATCCACATGGAACACGTTTTAGGCAAGATTCTTTTTAATGTTATTTGACTGCTCTTTGGCGCCACAATAATCACCTCATAGAATG GTTAAATAATTATATTTTGTCCAAGGATTTAAGCATAACATGTATAAATCAGTGGATTGTTGTCTAAGTCCAACATGATCTTTCAACACAAGATTTTGGT GGAAAAGATTTGGGAGACATGTACAATATCACAATGATGTTGTTTGATCCATGTAGTTGGCCACTTGGCCTTGCCTATTGGGTTTTTGTTGCTCTGTTAT TTACAAAGAATGTTTCTATTTAGTATATCATCCTAACACTCATTCACTCCCCAACTATTTTTCCAATCTCCCTTTTCAAGGTTTGATTGTTGACAGTAGT ATTTATTCTTTTCCCTCAGTAAAATTTGTATTGTTTATTAATTACACCGATGAGAGTGCATCATCTTGAACTGCTCAGGTTTTAAGTGGTTTTATATGTA TGCATGCATGCATCATTGATAGAATTGTCTTTTTTTTAATCTGTTGCCATTGCTTTGACACAAGTAAAACATCCCACATTCAGCATCACTATTTTGTGGC TTCAAGATGACACTTTGTATTGAGAATTGAATTGATGTTAGTGCTTTCCTTTTCTTTTACCATACAGGTTTCTTCTTCCAGCATCACTAATTGTAATTAA TGACATTGCTGCTTATTTCTTTGGTTTCTTCTTTGGAAGAACCCCTTTGATCAAGTTATCTCCAAAGAAAACTTGGGAGGGCTTTATTGGGGCATCTGTT ACAACCATTATCTCTGCATTTCTGCTTGCTAGCATCATGGGTCGGTCTCAATGGCTAACATGTCCAAGGAAGGATTTGTCAAGTGGTTGGCTTGACTGTG ATCCTGGTCAGCTGTTTAAGCCAGACTCCTATTCCTTAACAGGGTGGTTTCCTCAGTGGTTTCCTTGGAAAGAGATATCAATCCTACCAGTTCAATGGCA TGTTTTATGTCTTGGCCTGTTTGCTTCAGTTATTGCACCTTTTGGGGGCTTCTTTGCAAGTGGTTTCAA
• Tissue: pods
• Gene name: LI_gene_179770;
• Additional information: details;

Expression of Ll_transcript_378931

FPKM

• PAB: 0.6
• PNAB: 1.2
• PS1: 0.9
• PS2: 0.8
• PS3: 1
• PW1: 0.7
• PW2: 1.2
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378931

• Blastp: Phosphatidate cytidylyltransferase 2 from Arabidopsis with 76.92% of identity
• Blastx: Phosphatidate cytidylyltransferase 2 from Arabidopsis with 76.92% of identity
• Eggnog: phosphatidate Cytidylyltransferase(COG0575)
• Kegg: Link to kegg annotations (AT4G22340)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439978.1)
• Pfam: Cytidylyltransferase family (PF01148.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;