Ll_transcript_377216

• Id Trinity: TRINITY_DN50778_c3_g2_i1
• Name Transcript: Ll_transcript_377216
• Sequence: AGTTTATGAAGAATTATAAAAGAATAGTGATTGGGGGAGATTCTGTTATGGAAATAAGAAATTGAAGTAATATGGAAATAGAGGAATGATTTGTTGAAAT GAAAGTGATAATATGATAGAGTTATTAAAGTAATTAAAAGAATAAATGAATATAATAATTAAATAAAAGAGGATAGAAAGAGCAGAGAGATGGAGTGTGT GTGTTAGCGATACAACCACAAGAACAACAACATTCATTCATTCATGGTTCAGTGATGCGTCTCACTCTCTTTTTCTCTGACCAATAATTCAGAATTGGAC CTAACAAAGAAAGAGGAATCAATACTCACTCTCCGATCTATCAAAGAAAGAGAGATCCCACACCTCTCTTTCAGGGATCCAGCCAAACGACTTAGGGTTT TGCGTTTCATTCATTCCTCGTCGTATGGCTACTACCACTTCTTCATCATCATCTTCTTCTTCCTCTTCCTCTTCCTCTTCTCCTCTCTCTAGCTGGAGAG AGGGGATGTCCTCTGATAACATAAAAGGACTATGTTTGGCTCTCTCTTCAAGCTTCTTCATCGGTGCTAGCTTCATTGTTAAGAAAAAGGGTCTCAAGAA AGCCGGTTCCTCTGGTCTCAGAGCAGGAAGCGGAGGTTATTCTTACCTGTATGAACCGCTTTGGTGGGTGGGCATGATAACAATGATTGTCGGAGAGATT GCCAATTTTGCAGCGTATGCATTTGCTCCGGCTATATTGGTCACCCCTCTTGGTGCTCTCAGCATTATCATAAGTGCCGCTCTTGCTCATATAATTTTAC GGGAGAGGCTACATTTATTTGGAATTCTTGGTTGTGTTTTGTGTGTTGTGGGGTCTACAACAATTGTTCTACATGCACCTCAAGAGAGGGAAATTGAATC CGTGAGAGAAGTATGGGATCTTGCTATGGAGCCAGCATTTCTCTTCTATGCAGCTTTGATTATAACAGCAGCCTTTGTTCTTATCTTCCACTTCATTCCC CTATATGGCCAGACACATATACTGGTTTACATTGGTGTTTGTTCCCTTATTGGTTCTTTATCGGTTATGAGTGTTAAGGCTCTTGGAATTGCCATAAAGT TAACTCTATCAGGGATGAATCAGCTGATTTACCCCCAAACTTGGGCGTTCACGCTAGTTGTAGTTGTTTGTGTTCTTACCCAAATGAATTATTTAAATAA GGCACTGGACACTTTTAATACAGCAGTGGTGTCTCCTATATATTACACTATGTTCACCACACTAACCATCTTGGCTAGTGTCATCATGTTTAAGGACTGG GATAGGCAAAGTCCAACACAAGTTATCACAGAAATATGTGGCTTTGTGACAATACTTTCAGGAACTTTTCTTCTTCACAAAACTAAGGATATGACTGATG GTCATGGTATGCAATCATCTTTATCTTCTGTTAGACTTGCTAAGCATTCAGAAGAGGATGGACAGGATGATGTTGAAGGCATCCCTCTTACTCTAAGACG GCAAGAATCAATGAGAGATTCGTGATATATTATTTTCGTCTGAGTCACTCTTTTGCATAACTTACAAGCTTTGATGCGCTGGGGAGGGACTTTTCCAAGG TCATGGTGCAATTTATTGAGTAGTGATTGCCTCCCCGTCATATTTTTCTGTGATACAGTTGGAGTGGAAGGATGAGATTTTTGGTGTCGTTGTTCTTCAT GGCCTCTTCATGATTATGCTTTCCGATCTTTCCTTGTATACCTTTCACACTCCATACAGAAGACAAAGGCCAATGTAATTTTCTGCACACTGATTCTATA TAGTGTACCTCAGTTAAATGATAGTATTCTGCATATATTTTTGAATTGGACTGTATTGCTATGTTATTATCACTGTCTGCCATTTGATTATTAAGGTCAA ATGAATTGCTTAATGCATGCCTTTGGTGACCTTTTTAATAACTAAACACCTCATAACCATGCAACCTTGACCTCTTGCTTCTTCATCGTTCCTTGCTCTC TTTTTCTTTGCAATTAAAAAAATGAAGAGAACTTGATTGCCA
• Tissue: pods
• Gene name: LI_gene_179846;
• Additional information: details;

Expression of Ll_transcript_377216

FPKM

• PAB: 20.3
• PNAB: 31.9
• PS1: 32.8
• PS2: 23.2
• PS3: 40
• PW1: 21.7
• PW2: 28.6
• PW3: 24.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_377216

• Blastp: Probable magnesium transporter NIPA4 from Arabidopsis with 76.88% of identity
• Blastx: Probable magnesium transporter NIPA4 from Arabidopsis with 76.81% of identity
• Eggnog: NIPA-like domain containing(ENOG410XNR8)
• Kegg: Link to kegg annotations (AT1G71900)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418466.1)
• Pfam: Magnesium transporter NIPA (PF05653.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;