Ll_transcript_377425

• Id Trinity: TRINITY_DN50781_c1_g1_i11
• Name Transcript: Ll_transcript_377425
• Sequence: TGAATATTAATTTGTAACATGTTTTTTTTATAATAGGTTAAGATGATAGAATATTTAGTGAATAATAAATTCAATGTCAATTTTATTAAATTAATTCAAA TAGCATTGATTCAGTGACTTATGATGATGCTACTTGCTTGATCCTTTCCTCTGATCCCATTACTGAATACTGAATACAATAAAGCTGAAACAGAATCTGA ATTTGTTGAACAAAACTTCAAAATTCTCACAAATTCAAAACAGAAACAATGGACGCTCCGCAAGGTGGATCCGGATCCGAAAGAGACAAATCCAACACTT CCTCTTCTCCGATCTCCGTCGTAACCGCTTTCTGGAAAGATTTTGAATTGGAGAAGGAGAAATCGATTTTAGATGAGCAAGGGCTTCGTATTGCAGAAAA CCAGGAAAATAGTCAGAAAAATAGGCGTAAGCTTGCTGAGAATACTAGAGATTTCAAGAAAGCTTCACCTGAGGATAAGTTAAGTTTGTTTAACTCCTTG CTTAAGGGCTACCAGGAAGAGGTTGATAATCTTACTAAGAGAGCGAAATTTGGAGAAAATGCTTTTCTCAACGTCTATCAAAAACTATATGAAGCTCCAG ATCCTTATCCTGCCCTTGCATCAATTGCTGAGCAAGATCTCAATTTATCCGAGCTAGAATCTGAGAACCGTAAAATGAAAGTTGAACTTGAGGAATTCAG GACAGAGGCAACTCACTTAAAGAATCAGCAGGCCACAATACGAAGACTCGAAGAGAGAAATCGACAATTAGAGCAACAGATGGAAGAGAAAGTGAAAGAA ATTGTGGAAATCAAGCAACGCAGTCTAGCAGAAGAGAATCAGAAAACACTGGAAGTTTTGAAAGAAAGGGAACAAACACTGCAAGACCAGTTGCGGCATG CCAAAGATAGTGTTTCCAATATGCAGAAATTGCATGAACTTGCACAGAACCAATTGTTTGAGCTCCGTGCCCAATCCGACGAAGAGAGGGCTGCTAAGCA ATCAGAGGTCAGTCTTCTGATGGATGAAGTCGAACGAGCACAGACAATGCTTCTTAGTTTGGAAAGAGAAAAGGGGGTTCTCCGATCTCAGTTACAAACA AATGAAGAGACTGGAACTAAGACAAGTGATACTTTAGACTCAAACACTGTGCTTGAGAATTTTTTAAATGCCAAAGAGAAGCTAATCTCTGAATTGAACA TGGAGCTACACAATATTGAGACAACCTTATCAAATGAAAGAGAACAACACATAAATGAAGTCAAGAAACTGAATGCAATGCTCAATGAAAAGGAGGCTGC TCTTGAAGTGATGAAGAAAGGGCTTCAAGCAAGGCCAACAGAAAAAATGGTTGATGATCTGCGTAAGAAAGTGAAGATTTTGCAGGCAGTGGGTTATAAT TCGATTGAGGCTGAAGACTGGGAAGTGGCTACAAGTGGGGAGGAGATGAGCAAGATGGAGTCTCTTCTTCTTGATAAGAACCGCAGAGTTGAACATGAAT TAACACAGTTGAAGGTCAAACTTTCAGAGAAAACATCCTTAATGGAAAAAGAAGAAAAGAAGATAACAGAACTCACAGCAAAGGTTAATGAACAACAAAA GTTGATACAGAAGCTGGAAGATGATATATCGAAGGGCTATAGTTCCAATCCAAAAGATCGTAAAGGGACTTTCCTTGATGACTGGGATCTTTCAGAAGCT GGTGGTGGTGAGACATCTGAGAATACAGACCAAAGGCAGGCATCCTTAGACCAAGATCAAAGCTCAATGCTTAAAGTTATATGTAATCAGAGAGATCGGT TTAGGACACGCTTGCGAGAGACAGAAGAGGAAATAAGGATGTTGAAGGAGAAGATTGGGATGCTCACAGTGGAACTGGAGAAGACCAAAGCTGATAATGT TAAATTATACGGGAAGATTCGTTATGTCCAAGATTATAATAATGAGAAAGTGGTTTCTCGGGGTTCTAAAAAGTATGCAGATCTTGAAAGTGGTTTCACA TCAGATGTTGAATCTAAATACAAGAAGATATACGAGGATGATATAAATCCTTTTGCTGCATTCTCGAAAAAGGAAAGGGATCAAAGATACAAGGAGCTGG GATTCAGGGACAGAATTACACTCAGCAGTGGACGTTTTCTTCTTGGTAACAAGTATGCGCGGACTTTTGCGTTCT
• Tissue: pods
• Gene name: LI_gene_179860;
• Additional information: details;

Expression of Ll_transcript_377425

FPKM

• PAB: 0
• PNAB: 10.4
• PS1: 11.8
• PS2: 9
• PS3: 12.1
• PW1: 8.2
• PW2: 6.4
• PW3: 5.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_377425

• Blastp: Protein CASP from Arabidopsis with 81% of identity
• Blastx: Protein CASP from Arabidopsis with 81% of identity
• Eggnog: Cut-like homeobox(ENOG410XPRP)
• Kegg: Link to kegg annotations (AT3G18480)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448393.1)
• Pfam: CASP C terminal (PF08172.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;