Id Trinity | TRINITY_DN50781_c1_g1_i12 |
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Name Transcript | Ll_transcript_377426 |
Sequence | TGAATATTAATTTGTAACATGTTTTTTTTATAATAGGTTAAGATGATAGAATATTTAGTGAATAATAAATTCAATGTCAATTTTATTAAATTAATTCAAA TAGCATTGATTCAGTGACTTATGATGATGCTACTTGCTTGATCCTTTCCTCTGATCCCATTACTGAATACTGAATACAATAAAGCTGAAACAGAATCTGA ATTTGTTGAACAAAACTTCAAAATTCTCACAAATTCAAAACAGAAACAATGGACGCTCCGCAAGGTGGATCCGGATCCGAAAGAGACAAATCCAACACTT CCTCTTCTCCGATCTCCGTCGTAACCGCTTTCTGGAAAGATTTTGAATTGGAGAAGGAGAAATCGATTTTAGATGAGCAAGGGCTTCGTATTGCAGAAAA CCAGGAAAATAGTCAGAAAAATAGGCGTAAGCTTGCTGAGAATACTAGAGATTTCAAGAAAGCTTCACCTGAGGATAAGTTAAGTTTGTTTAACTCCTTG CTTAAGGGCTACCAGGAAGAGGTTGATAATCTTACTAAGAGAGCGAAATTTGGAGAAAATGCTTTTCTCAACGTCTATCAAAAACTATATGAAGCTCCAG ATCCTTATCCTGCCCTTGCATCAATTGCTGAGCAAGATCTCAATTTATCCGAGCTAGAATCTGAGAACCGTAAAATGAAAGTTGAACTTGAGGAATTCAG GACAGAGGCAACTCACTTAAAGAATCAGCAGGCCACAATACGAAGACTCGAAGAGAGAAATCGACAATTAGAGCAACAGTTATGTGAGTCAGATGGAAGA GAAAGTGAAAGAAATTGTGGAAATCAAGCAACGCAGTCTAGCAGAAGAGAATCAGAAAACACTGGAAGTTTTGAAAGAAAGGGAACAAACACTGCAAGAC CAGTTGCGGCATGCCAAAGATAGTGTTTCCAATATGCAGAAATTGCATGAACTTGCACAGAACCAATTGTTTGAGCTCCGTGCCCAATCCGACGAAGAGA GGGCTGCTAAGCAATCAGAGGTCAGTCTTCTGATGGATGAAGTCGAACGAGCACAGACAATGCTTCTTAGTTTGGAAAGAGAAAAGGGGGTTCTCCGATC TCAGTTACAAACAAATGAAGAGACTGGAACTAAGACAAGTGATACTTTAGACTCAAACACTGTGCTTGAGAATTTTTTAAATGCCAAAGAGAAGCTAATC TCTGAATTGAACATGGAGCTACACAATATTGAGACAACCTTATCAAATGAAAGAGAACAACACATAAATGAAGTCAAGAAACTGAATGCAATGCTCAATG AAAAGGAGGCTGCTCTTGAAGTGATGAAGAAAGGGCTTCAAGCAAGGCCAACAGAAAAAATGGTTGATGATCTGCGTAAGAAAGTGAAGATTTTGCAGGC AGTGGGTTATAATTCGATTGAGGCTGAAGACTGGGAAGTGGCTACAAGTGGGGAGGAGATGAGCAAGATGGAGTCTCTTCTTCTTGATAAGAACCGCAGA GTTGAACATGAATTAACACAGTTGAAGGTCAAACTTTCAGAGAAAACATCCTTAATGGAAAAAGAAGAAAAGAAGATAACAGAACTCACAGCAAAGGTTA ATGAACAACAAAAGTTGATACAGAAGCTGGAAGATGATATATCGAAGGGCTATAGTTCCAATCCAAAAGATCGTAAAGGGACTTTCCTTGATGACTGGGA TCTTTCAGAAGCTGGTGGTGGTGAGACATCTGAGAATACAGACCAAAGGCAGGCATCCTTAGACCAAGATCAAAGCTCAATGCTTAAAGTTATATGTAAT CAGAGAGATCGGTTTAGGACACGCTTGCGAGAGACAGAAGAGGAAATAAGGATGTTGAAGGAGAAGATTGGGATGCTCACAGTGGAACTGGAGAAGACCA AAGCTGATAATGTTAAATTATACGGGAAGATTCGTTATGTCCAAGATTATAATAATGAGAAAGTGGTTTCTCGGGGTTCTAAAAAGTATGCAGATCTTGA AAGTGGTTTCACATCAGATGTTGAATCTAAATACAAGAAGATATACGAGGATGATATAAATCCTTTTGC BLAST |
Tissue | pods |
Gene name | LI_gene_179860; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_377426
Blastp | Protein CASP from Arabidopsis with 78.22% of identity |
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Blastx | Protein CASP from Arabidopsis with 78.07% of identity |
Eggnog | Cut-like homeobox(ENOG410XPRP) |
Kegg | Link to kegg annotations (AT3G18480) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448393.1) |
Pfam | CASP C terminal (PF08172.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |