Ll_transcript_377417

• Id Trinity: TRINITY_DN50781_c1_g1_i3
• Name Transcript: Ll_transcript_377417
• Sequence: ATTTTTTTGTTGTTGAAAGATTCATATACTCTACATTTTTCTCAAAAACATTGATAAGAGTTAGTTGCACAAAAATGACATTTCTATGATGATGAATGAA GCTAAGTTAATTGCTTCATAAACCATTTACGGGTCCATTTTTCTCACAACAAAATTCACATTCTCACATCTCCAAAGTGCAGTAATGGATAACTCTCCGC AACTTGGATCCGGATCCGAAAGAGACAAATCCAACACTTCCTCTTCTCCGATCTCCGTCGTAACCGCTTTCTGGAAAGATTTTGAATTGGAGAAGGAGAA ATCGATATTAGATGAACAAGGGCTTCGTATTGCAGAAAATCAGGAAAATAGTCAGAAAAATAGGCGTAAGCTTGCAGAGAATACTAGAGGCTTCAAGAAA GCATCGCCTGAGGATAAGTTAAGTTTGTTTAACTCCTTGCTTAAGGGCTACCAGGAAGAGGTTGATAATCTGACTAAGAGAGCAAAGTTTGGAGAAAATG CTTTTCTTAACATCTACCAAAAGCTGTATGAAGCACCAGATCCTTATCCCGCCCTTGCATCGATTGCTGAGCAAGATCTCAAGTTATCTGAGCTAGAATC TGAGAACCGTAAAATGAAAGTTGAACTTGAGGAATTCAGGACAGAGGCAACTCACTTGAAGAATCAGCAAGCCACAATACGAAGACTTGAAGAGAGAAAT CGGCAGTTAGAGCAACAGATGGAAGAGAAAGTGAAAGAAATTGTGGAAATCAAGCAACGCAGTCTAGCAGAAGAGAATCAGAAAACACTGGAAGTTTTGA AAGAAAGGGAACAAACACTGCAAGACCAGTTGCGGCATGCCAAAGATAGTGTTTCCAATATGCAGAAATTGCATGAACTTGCACAGAACCAATTGTTTGA GCTCCGTGCCCAATCCGACGAAGAGAGGGCTGCTAAGCAATCAGAGGTCAGTCTTCTGATGGATGAAGTCGAACGAGCACAGACAATGCTTCTTAGTTTG GAAAGAGAAAAGGGGGTTCTCCGATCTCAGTTACAAACAAATGAAGAGACTGGAACTAAGACAAGTGATACTTTAGACTCAAACACTGTGCTTGAGAATT TTTTAAATGCCAAAGAGAAGCTAATCTCTGAATTGAACATGGAGCTACACAATATTGAGACAACCTTATCAAATGAAAGAGAACAACACATAAATGAAGT CAAGAAACTGAATGCAATGCTCAATGAAAAGGAGGCTGCTCTTGAAGTGATGAAGAAAGGGCTTCAAGCAAGGCCAACAGAAAAAATGGTTGATGATCTG CGTAAGAAAGTGAAGATTTTGCAGGCAGTGGGTTATAATTCGATTGAGGCTGAAGACTGGGAAGTGGCTACAAGTGGGGAGGAGATGAGCAAGATGGAGT CTCTTCTTCTTGATAAGAACCGCAGAGTTGAACATGAATTAACACAGTTGAAGGTCAAACTTTCAGAGAAAACATCCTTAATGGAAAAAGAAGAAAAGAA GATAACAGAACTCACAGCAAAGGTTAATGAACAACAAAAGTTGATACAGAAGCTGGAAGATGATATATCGAAGGGCTATAGTTCCAATCCAAAAGATCGT AAAGGGACTTTCCTTGATGACTGGGATCTTTCAGAAGCTGGTGGTGGTGAGACATCTGAGAATACAGACCAAAGGCAGGCATCCTTAGACCAAGATCAAA GCTCAATGCTTAAAGTTATATGTAATCAGAGAGATCGGTTTAGGACACGCTTGCGAGAGACAGAAGAGGAAATAAGGATGTTGAAGGAGAAGATTGGGAT GCTCACAGTGGAACTGGAGAAGACCAAAGCTGATAATGTTAAATTATACGGGAAGATTCGTTATGTCCAAGATTATAATAATGAGAAAGTGGTTTCTCGG GGTTCTAAAAAGTATGCAGATCTTGAAAGTGGTTTCACATCAGATGTTGAATCTAAATACAAGAAGATATACGAGGATGATATAAATCCTTTTGCTGCAT TCTCGAAAAAGGTGGCTCAGCTAGTCTACTCTAATGATGCACATCATATATTTTGTAATTGGCATTTGCATTTTATGTTCGTATCTAGTGGTACAGCTTG ACTCTCTAATATGAGTATGTGTTTTCAAACAAAAACCTCTATTTGTCCAAGATAATTAAAAACCATATATGATTTTTAAAGGAAATTCTTATTATTTTTA AGGCTGATCGAACAACAGTACTTCTCAAATGTTTGTGTGAAATAATTTCTATTGATAATGAGGTTTTAGGTGTATCATATTATAGAGATTGCAAAATGGT ATGTCTAATCATCAGGTAAAGGGAACATTTCCTGGCATTTCTTTCATAGAAAGTCTAAACTTCCATTTGTTAAATATGCATTTTACTTACTGTAAACATA GCGATAGCTATTGAACACTGGTATTAGGGACTATCCTGATATTTAGATATCCCTCTCATTCCCCACCTTACCAATAACAGGGAGGCAGGTGGTTGGGGGC ATGAGGAGAAAAGATAAAGGGCTATTGGTTGAAAACATGAAAAAGTTATCTATAACTGAGTTTTATGTTTCCGAATCAATATTATTTAGTTCTAATCATT ATGAAGGATTTAGATGTAAATGGTTTATCTGTTGACATGATTAATTATAAGGCATTATAGCATCATTTGATCCATGTAGCCACCTAGCTAATGGAAAAGG CATGAGTTTGTTGTTTGATGAACTGATCCATCTTTTTTCCATATAATTAGGAAAGGGATCAAAGATACAAGGAGCTGGGATTCAGGGACAGAATTACACT CAGCAGTGGACGTTTTCT
• Tissue: pods
• Gene name: LI_gene_179860;
• Additional information: details;

Expression of Ll_transcript_377417

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.2
• PS2: 0.2
• PS3: 0.2
• PW1: 0.3
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_377417

• Blastp: Protein CASP from Arabidopsis with 80.76% of identity
• Blastx: Protein CASP from Arabidopsis with 80.76% of identity
• Eggnog: Cut-like homeobox(ENOG410XPRP)
• Kegg: Link to kegg annotations (AT3G18480)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448393.1)
• Pfam: CASP C terminal (PF08172.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;