Ll_transcript_377419

• Id Trinity: TRINITY_DN50781_c1_g1_i5
• Name Transcript: Ll_transcript_377419
• Sequence: ATTTTTTTGTTGTTGAAAGATTCATATACTCTACATTTTTCTCAAAAACATTGATAAGAGTTAGTTGCACAAAAATGACATTTCTATGATGATGAATGAA GCTAAGTTAATTGCTTCATAAACCATTTACGGGTCCATTTTTCTCACAACAAAATTCACATTCTCACATCTCCAAAGTGCAGTAATGGATAACTCTCCGC AACTTGGATCCGGATCCGAAAGAGACAAATCCAACACTTCCTCTTCTCCGATCTCCGTCGTAACCGCTTTCTGGAAAGATTTTGAATTGGAGAAGGAGAA ATCGATATTAGATGAACAAGGGCTTCGTATTGCAGAAAATCAGGAAAATAGTCAGAAAAATAGGCGTAAGCTTGCAGAGAATACTAGAGGCTTCAAGAAA GCATCGCCTGAGGATAAGTTAAGTTTGTTTAACTCCTTGCTTAAGGGCTACCAGGAAGAGGTTGATAATCTGACTAAGAGAGCAAAGTTTGGAGAAAATG CTTTTCTTAACATCTACCAAAAGCTGTATGAAGCACCAGATCCTTATCCCGCCCTTGCATCGATTGCTGAGCAAGATCTCAAGTTATCTGAGCTAGAATC TGAGAACCGTAAAATGAAAGTTGAACTTGAGGAATTCAGGACAGAGGCAACTCACTTGAAGAATCAGCAAGCCACAATACGAAGACTTGAAGAGAGAAAT CGGCAGTTAGAGCAACAGATGGAAGAGAAAGTGAAAGAAATTGTGGAAATCAAGCAACGCAGTCTAGCAGAAGAGAATCAGAAAACACTGGAAGTTTTGA AAGAAAGGGAACAAGCACTACAAGACCAGTTGCGGCATGCCAAAGATAGTGTTTCCAATATGCAGAAATTACATGATCTTGCACAAAATCAGTTGTTTGA ACTCCGTGCTCAATCTGACGAAGAGAGGGCAGCTAAGCAATCAGAGGTCAGTCTTCTGATGGATGAAGTTGAACGAGCACAAACAATGCTTTTTAGTTTG GAAAGAGAAAAGGGGGCTCTCCGATCTCAGTTACAAACAAATGAAGAGACTGAAACTAAGAAAAGTGATACTTTAGACTCAAATACTGTGCTTGAGAATT TTTTAAATGCCAAAGAGAAGCTAATCTCTGAATTGAACATGGAGCTACACAATATTGAGACAACCTTATCAAATGAAAGAGAACAACACATAAATGAAGT CAAGAAACTCAATTCAGTGCTCAATGAAAAGGAGGCTGCTCTTGAGGTGATGAAGAAAGAGCTTCAAGCAAGGCCAACAGAAAAAATGGTTGATGATCTG CGTAAGAAAGTGAAGATTTTGCAGGCAGTGGGTTATAATTCGATTGAGGCTGAAGACTGGGAAGTGGCTACAAGTGGGGAGGAGATGAGCAAGATGGAGT CCCTTCTTCTTGATAAGAATCGCAAAGTTGAACATGAATTAACACAGTTGAAGGTCACACTTTCAGAGAAAACATCCTTATTGGAAACAGCTGAACAGAA GATAACAGAACTTACAGCGAAGGTTAACGAACAACAAAAGTTGATACAGAAGTTGGAAGATGATATATCAAAGGGTTATAGTTCCAATCCAAAAGATCGT AAAGGGACTTTCATTGATGACTGGGATCTTTCAGAATCTGCTGGTGGGGAGACATCTGAGAATACAGACCAAAGGCAGGCATCCTTAGACCAAGATCAAA GCTCAATGCTTAAAGTTATTTGTAATCAGAGAGATCGATTTAGGACACGCTTGCGAGAGACAGAAGAGGAAATAAGGATGCTGAAAGAGAAGATTGGGGT GCTAACAACAGAACTGGAGAAGACCAAAGCTGATAATGTTAAATTATATGGGAAGATTCGTTATGTCCAGGATTATAATAACGAGAAAGTTGTTTCTCGG GGTTCTAAAAAGGTTTTCAAAATTGTTCACTGTTTTGTCATCATGCTCTTACCTTTTTCAAGTTCATAGTTTTTAATTTCTTTCCCTGTTTTCTTTTACT CATATTTGTTTGTGATTTGATGCTCAGTATGCAGAAGATCTTGAAAGTGGTTTTGCATCAGATGTTGAATCTAAATACAAGAAGATATACGAGGATGATA TAAATCCTTTTGCTGCATTCTCGAAAAAGGAAAGGGATCAAAGATACAAGGAGCTGGGATTCAGGGACAGAATTACACTCAGCAGTGGACGTTTTCTCCT TGGTAACAAGTATGCGCGCACTTTTGCATTCTTTTATACCATTGGATTGCATATCTTGGTCTTCACTTGTCTCTATCGAATGTCTGCTTTGAGTTATCTT AGCAATGGCCCAGAGGAGTTCCTGATTGGAGAGAAAAATGTTGATTTACCACGAGCACCGTAGTGGCTATGCACTCAATTTCCGGGGTAATTTTCTCCAA TAGAACAGTGCACGTGGTGGGCTATATAACCTCTTTTCAGTGATCATTTTATAAATGGTACGAGAACACATTGTCAATGTTTAAATTAACAAACTTTGTT GTACATATACAGAGTTGTTTTACTCTATCAGTGTTGCGATGAAATATAGTGGCGTTGGGAAAGATGGCCTAGTGGTTCAAGGCATAGCATTGGAATTGCT ATGTAGGCTTTTTGTTATATCTTAAGAATGACAGAACACAGAAATCAATATCCCTAGTCTTAGTCATAGCAACATGTTTTGTAAAATGAAGGATAAACCC CTACATCATTCATCTCTGTTTTTTAGAGATGTCTCGTGTCAAGTGCTTCACCATTCTTATGAATTAGATGATCATGTTTGGCAAATTCTTAAGAGTTTTT GGAGATGGGGATGCCCTCATCCTATGAGCAAGAAACTAATTCATTTCGAACTGTGTGATTATTGATTCACACAAATGTTGTTTATAGAAATCGAACTCTT AATCTTTAT
• Tissue: pods
• Gene name: LI_gene_179860;
• Additional information: details;

Expression of Ll_transcript_377419

FPKM

• PAB: 0.4
• PNAB: 1.8
• PS1: 0.8
• PS2: 1.3
• PS3: 1.5
• PW1: 1.4
• PW2: 1.4
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_377419

• Blastp: Protein CASP from Arabidopsis with 80.49% of identity
• Blastx: Protein CASP from Arabidopsis with 80.49% of identity
• Eggnog: Cut-like homeobox(ENOG410XPRP)
• Kegg: Link to kegg annotations (AT3G18480)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436665.1)
• Pfam: CASP C terminal (PF08172.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;