Ll_transcript_378727

• Id Trinity: TRINITY_DN50784_c2_g1_i4
• Name Transcript: Ll_transcript_378727
• Sequence: AATAAAAGGAAATTGAGTTGAGAAGAAAAAGTGTTAGAAACGACGCTCTTAGTTCTCATCAATGGCCGTTTCAGCGTTGAGAAGTGTTTGTAGTGTACAA CTACCATTCTTCAATCATCGCCATCACCATTTTCGTTTATCACCTAACCATCTCAATGTTCATTCCAAGTCAAAGGGTTTCACTCTCTTCTCTCGCTATG CTCAACCTCAAGCTCAAGATCTCTCTTCATCTTCTCATCGTTTCCAAGATAGGATAGAAAACTTTCCGAAGCTAGTGGAAGATATTGTCCAGACATCGAT AAATACAGGTCCAAGGGGTGTTCTTAGGCTTGCTCAAGGTCTTCAAGCCTTCATTGGTGTTGGCCAAGAGTGGTTAAATGATGTTTCTAAGTCAACAAAT TCAACTGCCGGGTTACCAACTGAAATGCAGCTTGGTTTACTTTCCCCCTTTTATGTGAGGAGGTTGTTTGAACGTTTGGGGGCAACTTACATCAAACTAG GTCAGTTCATAGCATCAGCACCAACACTGTTTCCTCCTGAGTATGTACAAGAATTCCAGAATTGCTTTGATAGAGCTCCTCCAATTTCTTTTGAGGAAAT CCAATCCATACTGCGTAAGGAACTAGGAAGACCAATAGAAAGTGTTTATGAGTATGTTGATCCAAAACCTCTTGCTTCTGCCTCTATAGCACAGGTTCAT GGTGCAAGGCTAAAAGGCTCCGGAGAGGATGTGGTTATAAAAGTATTAAAACCCGGAATAGAGGACATCTTAGTGGCAGATCTTAATTTTGTTTATGTTG TTGCTCGGATATTTGAGTTCTTGAGTCCTGAAATAAGCCGGACATCATTGGTTGGTATTGTCAAAGATATACGAGACTCAATGCTTGAAGAAGTCGACTT TTACAAGGAGGCTGCAAATATTGAGGCTTTCAGGAAATATTTAGAGGGCATGGGACTCACAAGGAATGCAACAGCTCCAAAAGTATATCAATACTGCAGC ACACAAAAAGTTTTAACTATGGAGAGACTGTACGGAGTTCCTATTACTGACCTAGACTCCATAAGATCTTTTGTTTCTAATCCAGAAGCCAGCTTGATAA CTGCTCTCAATGTGTGGTTTGGAAGTTTGCTTGCATGTGAGTCTTTTCATGCAGATGTTCATGCAGGAAATCTTTGGCTTCTGCGTGATGGCCGTATTGG ATTTCTTGACTTCGGTATGCTTTATATTCCTCGTGCTTGGTTTACAGATGGTTTTACTTAAGCTTTAACTTTTTGTAGTTCATTTGCAATCTGTTAAGTT TTCATATGTATGAAATTGAAAATAGCTATACATATTTTTTGAAATTTAAGCATTTTCCCATGTTTCTATCAATTGAATGTTCAGGTTTCATCACCAGTCT TATGTTTCAGTTTTGCTAACTTTTATGCCCCCCACTAAAAAAGGACACATTACCTTAGATAAATTGATGCAAACAAACCATGGAACTAACACATGTGGAT TAGTTATTTGTAATGCTTGCCACCTATAATTCCAACCTGGAACACACTTACTTCCTATTTCGATGCATATAGTTACAAATAAAAACATATGCTCTAACTT CTATACTTATCATCTCATGCAATTCAAGAGTTCTCATTCTATCCCAGCCTATATTAAATGTCTAGAAAATTTTGATGCATTAATTTCGTGTATTTTATGT TGCCAGTCCCTTGTGGAAAAGAAATTTTTGATCATTACTTCTGTCAACCAGGATACTTACTGCTGTGCTTACTATGAGGAACCATGTTGCAAATTCTAGT CACTTTTTTTGCTTTGTTATTTTACAAACTCACCATCATAATTGACAATATCGAGATCTTGCATAAGATTGCAAGGGGTAGATGAAAACGTAAAATGTAT GATTGTAACACGGATCACAAGATCCTACCAAATGTTGATATTTTAGACATACATATACACAGAATAATAAAATCTTCAACTTTCTCCATTGCTATAAATA ACAAAATTAACAAGTAGCACTTGATAAAACTTAAACTCCCAACATCAAAATATATGCATACAAAAATATTAGGTCTCACATAATTACAAAACTAACATGT CAACATAATCAACTAAAGTGTTTGATAGCAAAAAACACTAACAAGTATCAGAGCCTAATATTGTATCACATACATATTATATTATATATATATATATATA TATATATATAATATGTGTGTGGAAGTATCATGTAGCTACAGGGTGATTTATAATAGTATGCATGTGGAAAGTAGAACGAAAGCACATAAAAAGGAGAGAG AACATAGTGAACCTCATTTTTCTCCCATTACACATTATAACATAAAAGAGAGAAAGAACATCACTTAAGAGAGAATAAGGAAAACAAATATGTTGAAGAT GAAGATGATAATAAAAAAACGTCTTGAAAATGAAGTCTTTGGGAGTTTCTGGTTGTGGCTGTAACTTCTACTGCTATTGTGGTTATGGTTTGTTTGTTAT TTTGCAATTTATGGGTTAGAAGAATTTTGGGCGGGTCAAATGTTTTTGGGTCATGAATTTCCCCTTCTATATGAGTTTAAAAGATGAGGATTTTGCAATT TAGGGTTTTTGCCATAAAAACAGAAAATCACAAAGAGATGACAATTTTACGATCCTGCGATCTTACCGGCGATCTCACTGATGGTGGTATATCGCATTCA AAGTGGGCACGCGAATCGCTAGCTCTTGAAAACTCGTAAGATCTACCGATCCTATGAATCTTAACTACTATGCTCACCATCTCTTTACTCGTTGAAACAG CTGAAGTTTTGCAGTATTTTTGTTGGATGTACATACATATATATGTAGGTATTTTTTTATGTGTAATGAATTTCAATCAACAGGAATTGTTGGACGTATT TCCCCCAAAACATGGGCAGCTATGGAAGTTTTCTTGGGATCAATTGCCATTGAAGATTATGATTCAATGGCATCCTCCTTAATTCAAATGGGTGCTACAA ACAAGGATGTTAATGCTAAGGCCTTTGCCCTGGATTTGAAAAAAGTATTCTCATCAATTAAGGAGTTGGACAGTGAAATAGTTGTAGCAGCTAGAAGTGG GACAGCCACAAGTGCACCTGCTGTCTCTGCTAATGTAGTTGTTGATGAGAGGCAGATGAATGCACTCTTTCTTGACGTGGTTCGGGTAAGCGAATCATAC GGGCTAAAGTTTCCTCGAGAATTTGCACTTCTTCTGAAGCAGCTCTTGTATTTTGACCGTTACACGCGATTATTGGCTCCCAATTTGAATATGCTCCAGG ACCAGAGGATTTCCATTAGCTCCAATAGAAGAAACAGGTATAGAGACAGCTTTTAATGACCCACTATTCAAAATCCAGATGTACCAAATTATGGTTCAGA AGCTTGTGTATTGTAACTTCTATATATATTAAAAGGAACCCATAGTTGGGGTTTCACTTTCTGATAGCTACATATAAAAAACTGGCGTCACTCTTGTTCC TTTTATGACACCAACTTGGAATTCCTTATACGGCAAAAGTTTAATTATAAAAATATAAATTTGGGATCAGAAATTTGTCTTAGCAATCATCTGCAGTATG TGTTAGCTTGCCACTTCATTCTATTCTTATTATGCACCCTTTGTTCATTCCTATGTGAAACTCTTGTTGACAAATGATGTGGCTCTTCT
• Tissue: pods
• Gene name: LI_gene_179888;
• Additional information: details;

Expression of Ll_transcript_378727

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0.1
• PS2: 0.3
• PS3: 0
• PW1: 0
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378727

• Blastp: Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic from Arabidopsis with 73.57% of identity
• Blastx: Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic from Arabidopsis with 73.27% of identity
• Eggnog: Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)(COG0661)
• Kegg: Link to kegg annotations (AT5G05200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460672.1)
• Pfam: ABC1 family (PF03109.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;