Ll_transcript_378352

Id TrinityTRINITY_DN50787_c1_g1_i11
Name TranscriptLl_transcript_378352
SequenceAGAAGCTGTTCTACTCTCTCTCCCAGAGGTGATGACATCTGCACACTCTTTCTTTTCCATTGGGTTACTTTTTTGTAAATTGAAGATTTCTCTTTAATCT CTCCTCACATTTTTCAGTTTCCATTTTCATTTTTATTTATATATTATTATTATTATTCCTTTCACCAAAACAAAGACCCTCTATTTTCTCACCTTCTATC CCTCTATGCTTGCTCTTCTCTCTTTGTTTTTTTGTTGTTGAAAAACAACTGAAATCCAATAAAAAAGCATCCACAACAACCATGGACTGTGTTACTCATT CTCTCACTTGATCTTCCTTTGAGTTTTTTCTTCATAGATCGGCTTTGTTTCATTTCCTGTATGCCAAACTTGGTGCACAACTTGCATCTTCATTCAGGAA CATTTAACTGTATTGAGTTGGGAAACTTATAGATTCCATCAATGCAAGGGCAAAGAAGTACGGTTGGTTCCTTGCCTGAAACCTTAGAATTTGATTGTGG ATCTACACCGAGTAACACTACAGTTAATCCGCCAATTTTCTGGAATAATATGCAGAATCAGGCAGAAAACCATATACCCGACTATATACTTTCCCCTAGT GAGATTAACTCATCTTATGTGAATTATATAAACCAGGATTGGCAGAACTTGAGTGGATGGAGCTTAGGTGAGCCAAGTTCCAGTAATACACAGAACGAGG TTAACAACAATGAGCAGAAAAGAGAACTCGGGTGGTCTTCTTCAGTAAGTGCTAGTGCAATAGGTGGTCCAATACTAGAAAGGTGCTTTAGACCAGCGAA TGCTCTTTCTCTGGACAATGTCATTACAAGTTATGTGCCTATGCACAGCTCCAATTCTCACTTGGTTTCCCAGAGTCTTAATTTAAATGCAAGCTTAGCA GATAACGGCAGTAATAATAGTCATCATGCGGAACATCCTAACTTGTCCAAGTCTAGTGGACCAATAAATGAGCATATTCCACCTATTACTAGTTCTGGTT CTTTTATGCTTCCTTCTGGATGTAATGGCTTTTTGATTGAGGATAGTGATGGTAGGCCAGGTTGTTCACAAGACACTCGCCGTGTATCTCGTAAAAGAAA GGCTGTTGAACGAGACTCTGGACAATCTTCAGATGTTGGAAGTTGTAGCTACAGCCAGAATAGAGATGGTAGTGCTTGGAGTACACTTCCTACTCAGAAT TATGCCGGGAGCAGTTTTAGAAGAACTGCTTCAGCAGAACAGGTAAATGCAAGACTTGGCCTGAGTATGGGTAATGTTACCTCTGAAAGTGTTCTGGATA CAAATGTTGCAGGAAGATCAGAAAGCTTCCTCAGAAATTGTCGTTTGCGGATAAATCCCTCAAGCCAACAAAATTCCATTCCTCCCGCTGCATTCCCAAG TGGGAGAGTGATTAGGAGTAATGGCGTTTCTTCGTCCACTTCAACATTGCAAAGGATTCATCCTGTTGATAATTCTCTAGACTTGAGGTCAGTACCACCA GTTGATACTACGATTCCTCAAAGCCAGCCCCTTCGAGTTCATGTTCCTGCTTTACCAAGGAATGCACAATCATTTAGGTGGAGTGTCGGATCTAGCTCAA CAAACAACCATTCATCAAACTCGGTTATAAGTGCAACTAGGGATAATCTACCACAACAGGAAGCTAGCTCAAGAAGTATGGCTAGAAACATTTTAGAACA ATCGATATTTTTACCCCCAACCAATTTAAGAAATTTGGTTCGAAATCCCGCAATTAGAGCTTCGAGTAGTGCAAATTTAAGTATCCCGGGAAATGTTACT TCATCCCAGCCTGGGTCAAATTCCGCTATCAATCCACCATCTGTCTCACCATGGGTTTCTCAGCCTAATCCTCAACAGCATTATCCACGCAGGTTAGCTG AATATGTTCAGCGGCCCATGTTTTCTCCTGGTTCCGAGGCTGCTGGAAATCCGATCAGCAATTATTCTTCCTTGCGTAGTCCAGCTATTTCATCTGGGTT GTCATCGGGGGTGGTACATCTGGGGTCCTCTTCAGTATTGGAGAGGCCAGGTGATAGTGAATATGCAATTGCTCCTTCATTGCGATCATTGCCTGGTGCA GGAAGTGGTAGAATTGTATCTGAGCTCCGCGATGTGTTGGGCCGCATGCGTAGGGGTAGGAACCTACGGCTTGAGGTCAGTTGTTTTTCCTTCAAATGAA CGATGTATATTCACTTCAGTAAAGCATTTGTGGCATATTTCTCTCAAATTTATTAACAATGCCATTTGGGTGTTCAAGACCTGTCTTGTCACCGTCCCAA CCTGAAGTGAACTAAATGCCTTCAGATTTTCAAAATTAGACTCGATTTTTTTTCTCATCGAATTCAGGTTACAATTCAAGGTGCCCAACCCTTCCCCATC TCACAAATTTCTTTAAAAAATACAATTGTTTTTTACAATTAAGCTTAACTAATAAATTTAAATTAATTACCTTTCCCATAATTCTATAATTTAGATATAC TGATATACATAATGTTCAAATTTGTACAATATGTCAATATTGGGTGAGGTCAGTTCCAACCCGGTCATTTTCGGGTCTGCTTCATGTCCAAACAAATGGT CCAATCAAAATGACACGAGTTTGGGCCATGCTAAACCCTCCTATCACATCCCACGAACACCCCTAAGCGTCAATGTGGCTTCAATCTGGCAATTCTGATT CTGTTTTGATGCAATTATGCAAAATATATTTTCACTTGTCCGTTGTGTTTAGCAGTAAGTTTTAAATTGCAAAGTTGTCCATGACAAGCTCCAACTTCTT TTTACCAAACTCTCTAGCGATACATAACTACGTATAAAAGTAATTAGCCTCTGATATGTTTTTATTTTATTTCTAAGCCTATCATGACAATGTTTCATAA CTATTAAGATGAAGTCCTGTCTCCAAATAGTTTAAAAATGAAAAAGAAAAAAATGAACATACTCTAAACATTTCATCTGCATTCTCTTTCCTTTTGGTTT CTTTTGTCGGTCTGAAAGATTAGTATTACATTGGTTTTTTGACAATATTTTAAACCCATTCTTATATGGTAATTAGAAGAGGGTGAGCCATGGCACAACG GTAAGGTTGTTTGCCTTGTGGCCTGGAGGTCATGAGTTCATATCTT BLAST
Tissuepods
Gene nameLI_gene_179931; 
Additional informationdetails; 

Expression of Ll_transcript_378352

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_378352
BlastpProbable E3 ubiquitin-protein ligase RHG1A from Arabidopsis with 31.29% of identity
BlastxProbable E3 ubiquitin-protein ligase RHG1A from Arabidopsis with 28.95% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (AT5G42940)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019436945.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;