| Id Trinity | TRINITY_DN50793_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_378267 |
| Sequence | GGTGACGAAACCTGTTTCAGCAATCAGCATCCAGTCATCCAGATCTTACTTCCTCCCACCAAACAACTTCCTCTCTCTTTTCCTTCTTTTTTTCTTTCCT CCCTCTTTCTCTCCCAAAGGAATTTTCTGCAACAGAACCAAAACCCGATATGCATTCGGTTAAGAAACAAAACAGAAGAAACAAAGAAACACATTATTAT TATTCATCATTATGAACTCTCATCATTTTACCTTCATTCTGTTACTCTCTTTATTCACTGCAAAAGTTATCACAATTCAACTCAATGAATATGAATCTCA CACACCAAGAAGAAGCTTACACCAGCCGTTATTCCCGGTGGATTCTTCTCCGCCGTCAACCACCGACTCACCACCACCACCGCCACCACCAGATACTCCT TCCTCTCCCGACATTCCTTTTTTCAACGAATATCCAATACCTCCACCGCCGCCTCTGCCGGAGCAGCAACTGCCGTCAACCCCCGCCGGCGCAATTGCGA CAAAGCCGACGGGAATGCAACAAACGAAGCCGACGAAGAAAGTCGCTATCGCAATCTCCGTCGGAATCGTAACAGTTGGAATGTTATCTGCACTCGCGTT CTTCTTATATAAGTACAGAACAAAGCACAGTGTGGAAACAACTCAGAAAGAAAAAAAAACTTGTGCGTGAAAATTCCCATTTTGTCCCTGACACTTCTAT TAATTCGCCTCAGCCACCACCACAGTCTAGTTTCCTCTACATTGGGACGGTTGAACCGAACCGAATATCGTTAAGTGAATCGGACCGAACCGGAAACGGC CAGAACCGGAAACTCAACAATTCAGTTAAGCTATTGGATCGGTACCGTCCCAGCCCTGAATTGCAGCCACTGCCGCCGTTGAATAAACCTTCAGATGAAA ATCACCTTCCGCCGGCGGCATCCTCGTCTTCCTCTTCCGACGAGGAAAGCCGCGTTACGAGGATTAATTCGCCGTCATTCAGTCATGAGGAGGACAGCTA TTATTGTACATCGGTGTCACCTCGTCATAGTTATCGGGATAATGGTAACACTTCGGCGGCGATTGTTGCCGGAGCTCCGGTGGTTCCTTTTTCTAAGAGA ACCTCGCCGAAATCTAGGCTTTCAGCTTCGTCGCCGGATAGGAGGAACATGATGATACCGTCTATAAAAAATTCCCCTCAGCAGCCGTCAATATCTCCGG CGCCACCACCACCGCAATCTAGAAGGCCGAAATTCTCAGAGCCTCCACCATCACTGGATTTGAGGCATCTTAATTCAGATGAGTTCATGACATCACTTCA TCCTCCACCACCGCCACCACCACTGCCACCACCACGACAAGCGATGCCTCGGCGAAAGGTTTGGTCTCCGATAAGAAGTGTGGCCTCGTCTATTGCTGCC TCGAGAAAGCATCAACAGTCTTGGTCTCCAAGTCAAGAAGGAGCAGCTTCTGCTTATTCTACTAACAGTGTCACAAAAGCAGCTTCAGTGGAAACTGATG ACATGGATGAAGGGAAACCTAAGTTGAAGGCTTTGCATTGGGATAAAGTGCGTGCAACCTCAGATCGCGCCACCGTGTGGGACCAGTTAAAATCAAGCTC CTTTCAGTTAAATGAGGACATGATGGAGAGTCTGTTTGGTTGCAATTCGACAAATTCTGCACCAAAAAAAGAGACTGTTACTAGAAAGTCAGTGCTTCCT CCTGTTGAGCATGAGAATAGGGTGTTAGACCCCAAGAAATCACAAAACATAGCTATACTCTTGAGGGCACTGAATGTGACCAGAGATGAGGTATCTGAAG CTCTTCTAGATGGGAATCCTGAAAGCTTGGGTGCTGAGCTGTTGGAAACTCTTGTAAAGATGGCTCCAACTAAGGAGGAAGAGATAAAACTTAAAAACTA TGATGGAGACCTCTCAAAACTTGGGTCTGCCGAAAGATTTCTTAAAACAGTGCTTGATATCCCTTTAGCCTTTAAAAGAGTTGAAGCCAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_180006; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378267
| Blastp | Formin-like protein 6 from Arabidopsis with 69.37% of identity |
|---|---|
| Blastx | Formin-like protein 6 from Arabidopsis with 79.21% of identity |
| Eggnog | inverted formin, FH2 and WH2 domain containing(ENOG410XQR0) |
| Kegg | Link to kegg annotations (AT5G67470) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423961.1) |
| Pfam | Formin Homology 2 Domain (PF02181.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |