Ll_transcript_378270

• Id Trinity: TRINITY_DN50793_c0_g1_i4
• Name Transcript: Ll_transcript_378270
• Sequence: GGTGACGAAACCTGTTTCAGCAATCAGCATCCAGTCATCCAGATCTTACTTCCTCCCACCAAACAACTTCCTCTCTCTTTTCCTTCTTTTTTTCTTTCCT CCCTCTTTCTCTCCCAAAGGAATTTTCTGCAACAGAACCAAAACCCGATATGCATTCGGTTAAGAAACAAAACAGAAGAAACAAAGAAACACATTATTAT TATTCATCATTATGAACTCTCATCATTTTACCTTCATTCTGTTACTCTCTTTATTCACTGCAAAAGTTATCACAATTCAACTCAATGAATATGAATCTCA CACACCAAGAAGAAGCTTACACCAGCCGTTATTCCCGGTGGATTCTTCTCCGCCGTCAACCACCGACTCACCACCACCACCGCCACCACCAGATACTCCT TCCTCTCCCGACATTCCTTTTTTCAACGAATATCCAATACCTCCACCGCCGCCTCTGCCGGAGCAGCAACTGCCGTCAACCCCCGCCGGCGCAATTGCGA CAAAGCCGACGGGAATGCAACAAACGAAGCCGACGAAGAAAGTCGCTATCGCAATCTCCGTCGGAATCGTAACAGTTGGAATGTTATCTGCACTCGCGTT CTTCTTATATAAGTACAGAACAAAGCACAGTGTGGAAACAACTCAGAAAGAAAAAAAACTTGTGCGTGAAAATTCCCATTTTGTCCCTGACACTTCTATT AATTCGCCTCAGCCACCACCACAGTCTAGTTTCCTCTACATTGGGACGGTTGAACCGAACCGAATATCGTTAAGTGAATCGGACCGAACCGGAAACGGCC AGAACCGGAAACTCAACAATTCAGTTAAGCTATTGGATCGGTACCGTCCCAGCCCTGAATTGCAGCCACTGCCGCCGTTGAATAAACCTTCAGATGAAAA TCACCTTCCGCCGGCGGCATCCTCGTCTTCCTCTTCCGACGAGGAAAGCCGCGTTACGAGGATTAATTCGCCGTCATTCAGTCATGAGGAGGACAGCTAT TATTGTACATCGGTGTCACCTCGTCATAGTTATCGGGATAATGGTAACACTTCGGCGGCGATTGTTGCCGGAGCTCCGGTGGTTCCTTTTTCTAAGAGAA CCTCGCCGAAATCTAGGCTTTCAGCTTCGTCGCCGGATAGGAGGAACATGATGATACCGTCTATAAAAAATTCCCCTCAGCAGCCGTCAATATCTCCGGC GCCACCACCACCGCAATCTAGAAGGCCGAAATTCTCAGAGCCTCCACCATCACTGGATTTGAGGCATCTTAATTCAGATGAGTTCATGACATCACTTCAT CCTCCACCACCGCCACCACCACTGCCACCACCACGACAAGCGATGCCTCGGCGAAAGGTTTGGTCTCCGATAAGAAGTGTGGCCTCGTCTATTGCTGCCT CGAGAAAGCATCAACAGTCTTGGTCTCCAAGTCAAGAAGGAGCAGCTTCTGCTTATTCTACTAACAGTGTCACAAAAGCAGCTTCAGTGGAAACTGATGA CATGGATGAAGGGAAACCTAAGTTGAAGGCTTTGCATTGGGATAAAGTGCGTGCAACCTCAGATCGCGCCACCGTGTGGGACCAGTTAAAATCAAGCTCC TTTCAGTTAAATGAGGACATGATGGAGAGTCTGTTTGGTTGCAATTCGACAAATTCTGCACCAAAAAAAGAGACTGTTACTAGAAAGTCAGTGCTTCCTC CTGTTGAGCATGAGAATAGGGTGTTAGACCCCAAGAAATCACAAAACATAGCTATACTCTTGAGGGCACTGAATGTGACCAGAGATGAGGTATCTGAAGC TCTTCTAGATGGTAAGTTTATCGTGTTCATTCGTTCCCATTTCTAGAAATTAATCAGGCTTTAGAACTTTTATTGCTTAGAACATGTGTATATGTTCATT CTTATTCATTTTCTCTCGATCCCATGTTTGGTGTTCCTTTATCCTTTCAGTTTTTTTTCAAATTGGCTATCTAACTTGCATAACAATAGATTTACTGATC TCTAATACCTTGATGACTGATATCAAGAGAGGACAAAGCAGTAACTCTCCCTTAACTTCCTAGTCCACATGGATATAATTACTCACTATTCCAAGAAACA ATTTTAATATATTGATGTCAAAATTGTCAAAGGTATGGATATTTACCATTTACTCGTACATTTTCTACGAGAGCAAGCACGTTACTTCTGTGTCGCTCCC TCAAATGAAAGTGTAAATGCAACTCCGTGGCGGATTCAGGAGACAATCAAATCTGAAAGACTCTCCTCCAAAATGAAGTTTGAAATCAATAATATTTCCC TTTCAAGGTTTCAGTTCATATTACTCTACTGAATAAGAAATATATCTATAGAATATGTGAAATGTCTGAAGATGGGTATTTACATTGACTATATCATCCT AGCTTGTTTTCCTGATATATCTGTTGTTTGTTTTTACCTTGAACGAAATGATCATAAGCGTTCATCGATTTCACTTTGTAAACATCATGTATTGTATTTT GTATGACCTAGGGAATCCTGAAAGCTTGGGTGCTGAGCTGTTGGAAACTCTTGTAAAGATGGCTCCAACTAAGGAGGAAGAGATAAAACTTAAAAACTAT GATGGAGACCTCTCAAAACTTGGGTCTGCCGAAAGATTTCTTAAAACAGTGCTTGATATCCCTTTAGCCTTTAAAAGAGTTGAAGCCATGCTTTATAGAG CTAATTTTGAAGCTGAAGTTAACTACCTTAGGAAGTCTTTTCAAACCCTGGAGGTAGCAAGTGAGGAATTAAAGAATAGCCGATTATTCCTTAAACTCCT TGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTTGGCACCAATCGCGGTGATGCTAAATCTTTCAAACTGGAAACACTCCTAAAACTTGTAGACATA AAGGGAACAGATGGAAAGACCACATTGCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTTCATGTGGTGAATCTGCAAATGAGAAGTCTCAGA ACCAAATGAGTTCCGAATTCAATGACGATGAGTTCAAAAAGAAAGGATTGCAGGTTGTAGCTGGACTGAGTAAAGACCTTGGTAATGTAAAAAAAGCAGC AGGAATGGACTCGGATGTCTTAAGCAGTTATCTCTCAAAGCTTGAAATGGGGCTTGATAAAGTGAGATTGGTTTTGCAATATCGGAATCCAGATATGCAA GGGAATTTCTTTCACTCGACAACGATATTTATGAAGGATGCTGAAGAGAAAATTGCTAGGATCAAGGCTGATGAGAAAAAGGCGTTATTCCTTGTGAAAG AAGTTACAGAATACTTTCACGGGGATACAGCAAAGGAAGAAGCACACCCTTTCAGAGTTTTTATGATTGTAAGAGACTTCCTAAATATTTTGGATCAAGT CTGCAAAGAAGTTGGAAGGATACAGGATAGGACGGCGATTGGTTCAGCCAGATCTTTCCAGATAGCTGCAAGTGCATCATTACCCGTTCTCAGCAGGTAC CGTGGAAGACAAGATAGAAGTTCAGATGAAGAAAGCTCGTCCCCCTAGTGTCAATATGAAATAAATAATAGTCCTTCAGGATAACAGCGAAAGTAAATTA ATGCTTTTGCAGATTGAAGTTAGTTCCCAGCATTTCATCATTAGGTATATTGGTATTTCTACTGAGAGAATCCCGTTCCACTGGTAATAGTGAAGAGGGA CTACAATCTCTGAGACTGCACATAAAATATTACAGGGATGATGAAGAGATAACAAGCTGTGTTGAAAGGAATCACACCATGATTACCACCTACACTGAGC TTTCATATGAAGTTGGAATGCTCATTAGTGCAAGACACGTATCATAGTAGTTTCTTCAACTCAAAGATGGGTCATAGTTATGATATTAGGCCAGTCTCAC ATTTTTCATATTATAGAATGTTTTTATTTTTTATATGTATTTTTTGGGACAACTATTAATAATAAGTAGCAGTTTTGCTGCAGTTCCTTTATGCATGACT AGCATTTGAAATCTAGTAGCACACTTGTTTGCAATGCACAATTACTAGTTCACTATGTACTGTTAAGACTCCAAGTGTAAATGAAATATGTCGAACATCG ACAATAAATGGAAAATGTGAGAACCATATGGGTGGATAGATCAGTG
• Tissue: pods
• Gene name: LI_gene_180006;
• Additional information: details;

Expression of Ll_transcript_378270

FPKM

• PAB: 0.8
• PNAB: 4.8
• PS1: 7.1
• PS2: 3.4
• PS3: 6.5
• PW1: 7.5
• PW2: 2.5
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378270

• Blastp: Formin-like protein 6 from Arabidopsis with 62.8% of identity
• Blastx: Formin-like protein 6 from Arabidopsis with 71.04% of identity
• Eggnog: inverted formin, FH2 and WH2 domain containing(ENOG410XQR0)
• Kegg: Link to kegg annotations (AT5G67470)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423961.1)
• Pfam: Formin Homology 2 Domain (PF02181.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;