Ll_transcript_515879

• Id Trinity: TRINITY_DN50804_c0_g3_i10
• Name Transcript: Ll_transcript_515879
• Sequence: AGAAAGTAAACTGTAAATAAAGAATTTATTCCATTTATATATGATTCGATTTCTTTATGTCTGATAAAACAAAAGAAACCAGTGTCTTATTCTAAGCACA AATCTGAGAGAATCTCCTTATAAAAAGGAAGCTTTCACTAAAAGAGTTTTCGGGTGGAATAATAAGGAGGAGGGGGAAGGTTTTCTACTACATCCTAGTG CAACAATGGCTGCTGTCGCGGAAGAACATGCGAACCACAAACTTGGGATAACTGATGATAATGATGAGATTGATGACAATCCAATTGAGCAAGTGCGGCT CACGGTTTCAATACATGATGACCCTACGCAGCCAGTACTAACATTCAGGACATGGGTTTTGGGTTTGGGATCATGTGTGCTCCTTGCATTTGTGAACGAA TTTTTTGGCTACAGAACCAACCCTTTAGGCATTTCATCTGTAGCAGCTCAGATTGTAACTCTTCCACTTGGGAAAATAATGGCTGCAACACTACCAACTA AAAGCATTCATGTCCCATTTACCAAATGGTCCTTTTCCTTCAATCCAGGGCCATTTTCTATGAAAGAACATGCCCTTATCACTATCCTTGCTGGCTGTGG ATCTAGTGGAGTTTATGCCATAGGCATTGTCACTATTGTTAAGGCTTTCTATCATAGGACTATCAATCCTATTGCTGCTTATATGTTAGCTATATCAACC CAGATGCTTGGATATGGATGGGCTGGGATATTTAGAAAATTCCTTGTTGACTCCCCATACATGTGGTGGCCTTCAAACCTTGTGCAGGTTTCTCTATTCA GGGCATTTCATGAGAAAGAAAGAAGGCCTAGAGGAGGACAGACTAGGCTTCAATTCTTTTTCCTGGTCTTTGTAGCAAGCTTTGTTTATTACACTATTCC AGGCTACTTCTTTCAAGGATTATCTGCTATCTCCATTGTATGTTTGATCTGGAAAAATTCAATAACTGCACAACAGATTGGTTCTGGCATGTATGGCCTT GGCCTTGGTTCATTTAGCCTTGATTGGAACGCTGTGTCTGGCTTCTTAGGCAGTCCCTTAGCTGTGCCTGGTTTTGCTATCATCAATGTGTTGGTTGGAT ATGTGTTGGTTTTGTATATTGCGATTCCCATTTTATATTGGAACAATGTATATGATGCAAAGAAGTTCCCCTTCATTAGTTCTTCAACATTCGACAATAC TGGTGCAAAATACAATGTTACGAGGATATTGAATGAGAAAAATTTTGACATTGATCTGAACAGTTATAACAATTACAGCAAACTCCATCTTAGTCTCATA TTTGCATTAAATTATGGGTTGAGCTTTGCAAATCTTACTGCAACTCTTTCGCATGTTGCCCTCTTCCATGGAAAAAAAATTTGGAGTTTGTGGAAGAAGA CAACTAGGGCAGCAACAAAAGGAGAAAATGAAGGAGATGTGCATACAAGAATAATGAAGAAAAACTATGAGGAAGTCCCTGAGTGGTGGTTTGTGACCAT CTTGGCTCTAATGATTGTTATGTCTTTGGTAGCTTGTGAAGGCTTTGGCCGGCAACTCCAATTACCATGGTGGGGATTCTTACTTTCTCTAGTAATTGCA TTAGTTTTCACCTTGCCAGTTGGGGTCATTCAAGCAACAACAAACATGCAAACAGGACTCAACGTGATCACAGAGTTGATTATTGGGTTCCTGTATCCAG GAAAACCCCTTGCTAATGTAGCTTTCAAAACTTATGGCTACATCAGTATGGCACAAGCACTTGGATTTCTTGCTGACTTCAAATTAGGCCACTATATGAA AATTCCTCCAAAATCTATGTTCATTGCACAGCTGGTGGGCACTATAGTTGCTTCAACTGTCCACTTTAGTACTGCATGGTGGCTTCTAACATCTATCCGT AATATTTGTGATGAAACATTGTTGCCAGAGGGTAGTCCATGGACATGCCCAAGTGATACTGTCTTTTATAATGCTTCAATTATATGGGGAGTAGTAGGGC CACAAAGAATGTTCACCAAGGATGGTCTTTACCCAGAGTTGAATTGGTTCTTCCTAATTGGCGCACTTGCACCAGTTCCAGTGTGGCTACTTGCACGACA ATTCCCTAACCATAAATGGATTGAACTCATAAACATGCCAATTATCTTTACTGGTGCTGGTGGCATCCCTCCAGTAAGAGCAGTGAACTATATTATGTGG GGCATTGTTGGAATCTTCTTCAATTTCTTTGTCTATAGAAAGTTCAAGGCATGGTGGGCTAGATATACTTACATCCTCTCAGCTGCTTTAGATGCTGGTA TTGCTTTCACCGGTGTCTTACTCTATTTTGCTCTCCAAAACTATGACATTTATGGACCTAAATGGTGGGGTCTTGAAGCAGATGATCATTGCCCATTAGC CAGATGCCCTACAGCTCCAGGTGTTGTCGTACATGGATGCCCTGCCACCTGATTTTCTTATTAATCCACCTTCAAGAGAAATTATTGTATAATATGGAAG AAATGGCCATTCGACTCATGTACATGTTAACTGGTTTTACAAGTACTCTTTTTATTAATTGTCCTGCAAAGTGGCAGAAGAATAATCATGAACATCTTTC CCAACAATAACTAGATTGTAGAATGTGTGATGCACAGCCTTTTATCTATTGTTATTGATGTAATGGACCTTATTACCCACTATAAGTGTAATTATAAAAA TAGTGAATAAGTTAGGAGAGAAAACATGTGATAAAAATTCCTAAATATCTCACAATTAACTTTAGTTCAAATTAGTTGGATACTTGTGCACTCGTATGAA TTTGTACATATTGTGAACACCATTTTTGTCCGACCCATAAAAAGCC
• Tissue: pods
• Gene name: LI_gene_180107;
• Additional information: details;

Expression of Ll_transcript_515879

FPKM

• PAB: 5.5
• PNAB: 17.5
• PS1: 39.4
• PS2: 21.9
• PS3: 39.4
• PW1: 0.4
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_515879

• Blastp: Oligopeptide transporter 1 from Arabidopsis with 65.79% of identity
• Blastx: Oligopeptide transporter 1 from Arabidopsis with 67.97% of identity
• Eggnog: oligo-peptide transporter(ENOG410XNZC)
• Kegg: Link to kegg annotations (AT5G55930)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415635.1)
• Pfam: OPT oligopeptide transporter protein (PF03169.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;