Id Trinity | TRINITY_DN50804_c0_g3_i8 |
---|---|
Name Transcript | Ll_transcript_515875 |
Sequence | AGAAAGTAAACTGTAAATAAAGAATTTATTCCATTTATATATGATTCGATTTCTTTATGTCTGATAAAACAAAAGAAACCAGTGTCTTATTCTAAGCACA AATCTGAGAGAATCTCCTTATAAAAAGGAAGCTTTCACTAAAAGAGTTTTCGGGTGGAATAATAAGGAGGAGGGGGAAGGTTTTCTACTACATCCTAGTG CAACAATGGCTGCTGTCGCGGAAGAACATGCGAACCACAAACTTGGGATAACTGATGATAATGATGAGATTGATGACAATCCAATTGAGCAAGTGCGGCT CACGGTTTCAATACATGATGACCCTACGCAGCCAGTACTAACATTCAGGACATGGGTTTTGGGTTTGGGATCATGTGTGCTCCTTGCATTTGTGAACGAA TTTTTTGGCTACAGAACCAACCCTTTAGGCATTTCATCTGTAGCAGCTCAGATTGTAACTCTTCCACTTGGGAAAATAATGGCTGCAACACTACCAACTA AAAGCATTCATGTCCCATTTACCAAATGGTCCTTTTCCTTCAATCCAGGGCCATTTTCTATGAAAGAACATGCCCTTATCACTATCCTTGCTGGCTGTGG ATCTAGTGGAGTTTATGCCATAGGCATTGTCACTATTGTTAAGGCTTTCTATCATAGGACTATCAATCCTATTGCTGCTTATATGTTAGCTATATCAACC CAGATGCTTGGATATGGATGGGCTGGGATATTTAGAAAATTCCTTGTTGACTCCCCATACATGTGGTGGCCTTCAAACCTTGTGCAGGTTTCTCTATTCA GGGCATTTCATGAGAAAGAAAGAAGGCCTAGAGGAGGACAGACTAGGCTTCAATTCTTTTTCCTGGTCTTTGTAGCAAGCTTTGTTTATTACACTATTCC AGGCTACTTCTTTCAAGGATTATCTGCTATCTCCATTGTATGTTTGATCTGGAAAAATTCAATAACTGCACAACAGATTGGTTCTGGCATGTATGGCCTT GGCCTTGGTTCATTTAGCCTTGATTGGAACGCTGTGTCTGGCTTCTTAGGCAGTCCCTTAGCTGTGCCTGGTTTTGCTATCATCAATGTGTTGGTTGGAT ATGTGTTGGTTTTGTATATTGCGATTCCCATTTTATATTGGAACAATGTATATGATGCAAAGAAGTTCCCCTTCATTAGTTCTTCAACATTCGACAATAC TGGTGCAAAATACAATGTTACGAGGATATTGAATGAGAAAAATTTTGACATTGATCTGAACAGTTATAACAATTACAGCAAACTCCATCTTAGTCTCATA TTTGCATTAAATTATGGGTTGAGCTTTGCAAATCTTACTGCAACTCTTTCGCATGTTGCCCTCTTCCATGGAAAAAAAATTTGGAGTTTGTGGAAGAAGA CAACTAGGGCAGCAACAAAAGGAGAAAATGAAGGAGATGTGCATACAAGAATAATGAAGAAAAACTATGAGGAAGTCCCTGAGTGGTGGTTTGTGACCAT CTTGGCTCTAATGATTGTTATGTCTTTGGTAGCTTGTGAAGGCTTTGGCCGGCAACTCCAATTACCATGGTGGGGATTCTTACTTTCTCTAGTAATTGCA TTAGTTTTCACCTTGCCAGTTGGGGTCATTCAAGCAACAACAAACATGCAAACAGGACTCAACGTGATCACAGAGTTGATTATTGGGTTCCTGTATCCAG GAAAACCCCTTGCTAATGTAGCTTTCAAAACTTATGGCTACATCAGTATGGCACAAGCACTTGGATTTCTTGCTGACTTCAAATTAGGCCACTATATGAA AATTCCTCCAAAATCTATGTTCATTGCACAGGTAAAATGTTTTTTTAAGTTTCAGAAAGAGTAGTTCTAAATCCTCATGACAACTTAATCTTTGTTTCAA CTAAATAATAAAATCTACGAGGATTTGGCAGGAAAATATTGCAAAACCCTTCACAAAATATAAAGATTCACACATATGAACATATATTAGATTAAATACT AATTCCTTTTTAATTTCCTCAGCTGGTGGGCACTATAGTTGCTTCAACTGTCCACTTTAGTACTGCATGGTGGCTTCTAACATCTATCCGTAATATTTGT GATGAAACATTGTTGCCAGAGGGTAGTCCATGGACATGCCCAAGTGATACTGTCTTTTATAATGCTTCAATTATATGGGGAGTAGTAGGGCCACAAAGAA TGTTCACCAAGGATGGTCTTTACCCAGAGTTGAATTGGTTCTTCCTAATTGGCGCACTTGCACCAGTTCCAGTGTGGCTACTTGCACGACAATTCCCTAA CCATAAATGGATTGAACTCATAAACATGCCAATTATCTTTACTGGTGCTGGTGGCATCCCTCCAGTAAGAGCAGTGAACTATATTATGTGGGGCATTGTT GGAATCTTCTTCAATTTCTTTGTCTATAGAAAGTTCAAGGCATGGTGGGCTAGATATACTTACATCCTCTCAGCTGCTTTAGATGCTGGTATTGCTTTCA CCGGTGTCTTACTCTATTTTGCTCTCCAAAACTATGACATTTATGGACCTAAATGGTGGGGTCTTGAAGCAGATGATCATTGCCCATTAGCCAGATGCCC TACAGCTCCAGGTGTTGTCGTACATGGATGCCCTGCCACCTGATTTTCTTATTAATCCACCTTCAAGAGAAATTATTGTATAATATGGAAGAAATGGCCA TTCGACTCATGTACATGTTAACTGGTTTTACAAGTACTCTTTTTATTAATTGTCCTGCAAAGTGGCAGAAGAATAATCATGAACATCTTTCCCAACAATA ACTAGATTGTAGAATGTGTGATGCACAGCCTTTTATCTATTGTTATTGATGTAATGGACCTTATTACCCACTATAAGTGTAATTATAAAAATAGTGAATA AGTTAGGAGAGAAAACATGTGATAAAAATTCCTAAATATCTCACAATTAACTTTAGTTCAAATTAGTTGGATACTTGTGCACTCGTATGAATTTGTACAT ATTGTGAACACCATTTTTGTCCGACCCATAAAAAGCC BLAST |
Tissue | pods |
Gene name | LI_gene_180107; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_515875
Blastp | Oligopeptide transporter 1 from Arabidopsis with 66.25% of identity |
---|---|
Blastx | Oligopeptide transporter 5 from Arabidopsis with 67.96% of identity |
Eggnog | oligo-peptide transporter(ENOG410XNZC) |
Kegg | Link to kegg annotations (AT5G55930) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415636.1) |
Pfam | OPT oligopeptide transporter protein (PF03169.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |