| Id Trinity | TRINITY_DN50807_c3_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_515012 |
| Sequence | AGTTCAAAAATATCTCTAGAAATGGAATAAAAAATTGTTGCTAGGATTTTAATATGCGTAGATGTAGAATTTTAATTAAACTGAAATTATTGATCATTAC ATAGAATTCAATTAAGATATTGTATGAAAGTATGATTAGATTTCTTCAATTTTTTTATTTCAGAATGAAAATATTTTTATTTTTAACTGGCTAAGTTCAA ATCAAAGAAGTCTTTTTTTTGGGGGGGTCTGACCTTATTTGACTTATTTTTTTTTAGTATTCCTAATTTATTACATTAATTAATATCTAAAAATTATAAT AAAAATAAAATTATACATATATATATAATATATTCATATCTATCTAATACAATAAAAATAAGAATTCTATAAAAAATCAAAAATACAATGAATTTTCTTA AAGAACAAAATGTTTGTTATGCTTAATATCTTTAGTTTGGTCTGTATTTGTATTCACTCTACCTTTTATTCAAGTAGTTTTTTCTTGGCGAAATTACCCG AAGCCTACGCTTTTTTAAATCCAATTGTCGATATTATGCCAGTAATACCTCTATTTTTTTTTCTCTTAGCTTTTGTTTGGCAAGCTGCTGTAAGTTTTCG ATGAGATCTTTAATTTGAATAATGTCCTAACAAAAAAAAAAAATTAGAATTTAATTTATTGGAAAACAATAATTTGAACATTTTAAAAATTTATAAGATC AGATAAGTCTTACAGGGTGAATCCTCGATTCAAATATTGATATTGAGATTTTTTGATAGACAATAAAAATCTGGACCATCTCATTATTTCCCGATTCTTA CGTTTTTTCTATTGAGAAATCCCAATCTGATTTTATTATTACGATTATTTTATTCGATTTGAGTCCACCACCAATACCTAGATTGTGGATATGAAATAAA ATTTTTGGTAATAGTAATAAAGGGATCGACTCTTACTACAAATAAATTTTCTAATTTTTTCTATTTCCTCGAAAACACTTACTTTCTTATCTTAGAAGAA ACTTAATGTGTAATATAAGAGAATCTATTCTCTTTCTCTGTCGTTTTTTTTTTAATTATTCTTGGAGATTTTGTAATGCTTACTCTAAAACTATTTGTTT ATACGGTAGTTATATTCTTTGTTTCTCTTTTCATCTTCGGATTCCTATCTAATGACCCTGGACGTAATCCAGGACGTGAAGAATAAAAAAAATATTTTTG GTTTTCTGTGTTTTGTTTTTCTTGCTTGTGCCGGATCTGTGGATTTTTAAATATTTTTTTATTAGGGTTTTATCTATTGTACATTTTAAACTAGTAAATA AAAGAGTAAGTAAAAAAAATAAAACAAAAGAAGATCCATAAGGTCAAAAGAACAAAATACCAAATAATCAATGGAAACGGAAAGAGAGGGATTCGAACCC TCGGTAAACAAAAAGTCTACATAGCAGTTCCAATGCTACGCCTTGAACCACTCGGCCATCTTTCCCTCCTACATAATATAATGATTATGACCCAGAAACC GGGTGAATAGTGAATCATTTATATTCCCATTTTTTTGCATAGAGGCGCATACAATCAATTCGAACTAAAAAAATAGAAAAAAATGTAGCAAAAAAAATCT TCTTCGAAGCTGTAGGATAAACCCATTTTTTTATTAATGAGTCTGTTTTTACGTTATTTCGTACAGTATTTACAATTCCTTTGTTTGTGGGATTATTTTC TTTTCTCGCGCGATAAAAAAGTAAATTATAGAATGGATTGCTACCTATGCCCAGATCTCGGATAAATGGAAATTTTATTGATAAGACCTTTTCAATTGTA GCCAATATCTTATTACGAATAATTCCGACAACTTCAGGAGAAAAAGAGGCATTCACTTATTACAGAGATGGTGCGATTTGATTATCTTTTTTTTTATTTA CATTTAGCGATCCCAGTTTTAGGAAAAAAGACACATTTTTCGGAGAGAAAGAAAGAAAAAAATTGAAAAAACCTACGCTTGCTGAAGGTGAAGTTTGTAA ATAAAACAATTAAATCCTTCTGTCGTGTATCCCCGATTAATGCAGCCTCATATACTTCTATTTTAGGTTTATAGTATTAAGCGAAAGGTTATACCTATAC CTAATGGAGTTAGGTCAACCCTACTCCACTAGTACTAATAGGCGGCCTGGGGGAAGAAGCACTACGCTTAGGAATCAACAACACGAAAGAAAACTTTGTA AAACTCAAATATCTTTCCTTACGGGATCGGAACTAACAAAAGAATGGTTGGGACAACAAACATCCATCTCGTTCGTATTTTGGATACCCGTATAACCATC CAAGACTGTTGGAGTGACTAATTCCAAGAAATTAAGCGGCGTTGAGGACAAAGAAATTGTTGGAGTTACCCTTTCTTATCCAGTACCAACATACTTGATG TTAAGAACAGATCTTTTACAGGAAGGTTGGCTAGAGATTTCTTGTAAAAACACTAGCCCCGCTCAGTTGATAATGAGAATACTGCAATCTTTTTTGATTC TATGTATTTTTTTATCATTATACACATAAAGGAGGAGCCGTATGAGATGAAAATCTTACGTACGGTTCTGGAACGGAGATTCTTTGAACTGAATGACGAC CGTAACGGATGTCGGCTCAATCGGAAGGAAATTATGCGGAAGCTTTACAGAATTATTATGAGGCTATGCGACTGGAAATTGATCCCTATGATCGAAGTTA TATACTTTATAACATAGGCCTTATCCACACGAGTAACGGAGAACATACGAAAGCTTTGGAATATTATTTTAGGGCACTCGAACGAAACCCCTTCCTACCC CAAGCTTTTAATAATATGGCCGTGATCTGTCATTACGTGCGACTATCTCCACTATAGAAAGAAAAAAAACAAGCAAATCCGCTAAGAAATACGAAAAAAT AGGCTTTCTACATATATATCGTACAAAACAACGACAACGATTTTTATCAGCTGTAGCAAAGAAAAAAACTTCATAGAAGTCGAAATATGAAGAAATATAT ATGCCTAGATACTTTTTTCTATGGATAAAGATTTAATTGATAGAGGAAGCACCGTAAAGATGCATTAGCGAGGTTTTGGACCAATAAAATAAGAACTGCT TACTTATATCATGATAGAAAAGTTAGGAATCTACTTATGTAATAAAGTAGATCCCCTAGGGTTTTGAGCAGCGGTGTAGTATCAGATCCCCAAGATAGTA AGTTTTTTCTTTCTTATCAAGAAAAAACTTTCTCAAAGATTCTATAGCAATTGATATATCATATATTTTTATATATCATATATGAAATCGAGATAGTTAC CTTTGAGAAATTATAATCAGAGTGTTAATGCCTATGCTTTATTCTTCTGAAGGTAGGAGAAAAGATAAAACTATAAAAAGGGAATTAAATTCTTCGTTAG TAATATTAATCCAAGTTGAAGTTTGAAACTCATGTAATTAACCTCTTTTGGTTAACTCCAGAAAAAAAATGGAACACCAAAAGAATTGACTTGCTGAGCC GTATGAGGCAGGAAACTCTCAAGTACGGTTCTAAGGGAAGGAATTTACTCACCTATTCCGACCGCGGAGAACAGGCCATTCGACAGGGATATTCGGAAAT TGCGGAGGCTTGGTTTGATCAGGCCGCTGAATATTGGAAACAAGCTATAGCCCTTACCCCTGGTAATTATATTGAAGCACAGAATTGGTTGAAGATCACA GGACGTTTTGAATAAGAACATTCTGTTTATTATTTATATTTTTTATATTTCTTTTTATCTATTCTATTTTGATATTTGATCTATTTATTATATATTTAAT TTGTTATAATATATTTAATTTGTTATAATTTATTGTTTGTTGTCCCCATCAGTCAAATAAAAAATATCGTTTATCGAGGAATAACTCATCAAAGAATTTC ATTATATCCCTTCTAAGTAAGGCCGAAAGTTCTATCTAGGAACTTTCTAATTAAAATCTGAATACGCTAGTTAGGTTGCACAAAAAAACTATTTAACTTC AATTCAAAACTCAGAAAATGTTTTAGAAGATTCAAAAAAGGTCCGTTGAGCGCCTCACTGCTATGTCATAATAGATCCGAACACTTGCCTCGGATTGACT TCTAGATCATAATTGTTCTAGTGAAGAACTAAAGAAAATAGATTAAAGAAAATATAGAATAGATTAGAGATAGATGGGAAATAAGAGAGAAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_180137; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_515012
| Blastp | - |
|---|---|
| Blastx | Photosystem I assembly protein Ycf3 from Sinapis with 100% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002248) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003606041.2) |
| Pfam | - |
| Rfam | tRNA (RF00005) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |