Ll_transcript_516745

• Id Trinity: TRINITY_DN50816_c2_g3_i1
• Name Transcript: Ll_transcript_516745
• Sequence: TCACATTCTCATTCTCATTCACTTCCTCTCTTCTCCTTTTCTTTATATAAACAAACTGCATTTACTCACTCTTCACTCATAACTTCTCTTTTCATCAACT TCTTCTGAATTCTCTGTCATGGATCTTCCTCCATTCTCATCTCCTCCTTTTCTCAACCACCAACTAACATCAATTCCTCCTCTTTCTTCTGCTCTCCATC TTCTCACTCATTTCCCACACACCCTCCACAAGGTGAAGAAAAGGGTAGGTGGGGTTTATGCATCACTATCAGAGAGGGGTGAGTATTATTCCCAGAGGCC ACCAACTCCACTATTGGACACTATCAACTATCCAATTCATATGAAAAATCTATCTACCAAGGAGCTGAAACAACTTGCCGATGAGCTGCGATCCGATGTT ATTTTCAGTGTTTCTAGAACTGGAGGTCATTTGGGCTCAAGCCTTGGTGTGGTGGAACTCACTGTTGCACTCCACTATGTCTTCAATACTCCTCAAGACA AGATTTTGTGGGATGTTGGTCACCAGTCTTATCCACATAAAATACTCACCGGTAGAAGGGATAAGATGCATACCATGAGGCAGACTAATGGATTATCCGG GTTTACAAAACGCTCCGAGAGTGAATATGATTGTTTTGGCACTGGTCATAGCTCAACAACTATTTCAGCTGGACTTGGAATGGCTGTTGGGAGAGACCTG AAGGGGAGAAAGAATAACGTAGTTGCTGTTATTGGGGATGGTGCTATGACAGCAGGGCAAGCTTATGAAGCCATGAACAATGCTGGATATCTTGATTCCG ATATGATTGTTATTCTAAATGACAATAAGCAGGTCTCGTTACCAACCGCAAATCTTGATGGACCCATACCGCCTGTAGGAGCTTTAAGTAGTGCTCTCAG TAGGTTACAGTCGAACAGGCCTCTTAGAGAATTGAGGGAGGTTGCCAAGGGATTAACTAAAAGAATTGGAGGTTCTATGCATGAATTGGCTGCAAAAGTT GATGAGTATGCTCGTGGCATGATCAGTGGTACTGGATCTACACTTTTTGAAGAGCTTGGACTCTACTATATTGGCCCAGTTGATGGTCATAATGTAGATG ATCTCATTGCCATTCTCAATGAAGTTAAAAGTACTAAAACAACTGGTCCTGTATTGATCCATGTTGTCACCGAAAAAGGTCGTGGATATCCATATGCGGA AAAGGCAGCAGACAAGTATCATGGAGTTACCAAGTTTGACCCAACAACTGGAAAGCAATTCAAAGCCAAGGCTAACACCCAGTCTTACACAACATACTTT GCGGAAGCTTTGATTGCAGAAGCAGAAGCTGACAAAGACATTGTCGCAATCCATGCTGCGATGGGAGGTGGTACTGGCATGAATCTCTTCCTTCGCCGTT TCCCGGCAAGATGCTTCGATGTGGGGATAGCAGAACAGCATGCTGTTACATTTGCTGCAGGTCTAGCTTGTGAAGGTATGAAGCCTTTCTGTGCAATTTA CTCATCATTCATGCAGAGGGCCTATGACCAGGTATCAATAACAACTCTCCTTAATAGTCGATGCATGATTAAAGCATGTAATCAATGCCAAAAGTATGTG TTGTGTCCATTTTACAGGTGGTGCATGATGTGGATCTGCAGAAGCTGCCTGTAAGATTTGCAATGGACAGAGCTGGATTGGTTGGAGCAGATGGTCCTAC ACATAGTGGTTCTTTTGACGTCACTTTTATGGCATGCCTCCCTAACATGGTGGTGATGGCACCTTCTGATGAAGCAGAGCTTTTCCACATGGTTGCTACT GCAGCAGCGATTGATGATCGACCCAGTTGTTTCCGGTACCCGAGGGGGAATGGCATTGGTGTTGAGCTTCCAAGTGGGAATAAAGGCATTCCACTTGAGA TCGGGAAAGGTAGAATACTGATTGAAGGGGAAAGAGTTGCCCTCTTGGGGTATGGATCAGCTGTTCAGAACTGCTTAGCCGCGGCTTCCTTAGTGGAACA TCATGGTTTGCGCATAACTGTTGCCGATGCACGTTTCTGCAAGCCATTGGATCGTTCCTTGATTCGCAGCCTAGCAAAATCACATGACGTGCTGATCACT GTTGAAGAAGGATCAATTGGAGGATTTGGATCTCATGTTGCTCAGTTCATGGCCCTCGATGGCCTTCTGGATGGCAAATTGAAGTGGAGGCCGGTGGTTC TTCCGGATCGTTATATTGACCACGGATCACCATCAGACCAATTGTCTCTAGCTGGTCTTACACCATCTCACATAGCAGCAACAGTGTTCAACATACTTGG ACAAACAAGAGAGGCACTAGAGGTCATGTCCATGTCATAAAAGTAATACCAAGAAGTGATTTACTTTTCACTTTCCTACAATATACAAAATATATGATTC ACCACCATGTGTAATACAAAGGAGTGATGTTAGAATGTGAATTATTATGTAAGTGGATAATGCAGTTCTTCAAATAGTAATACCAACTTCTTGTAATGTA AAGGGGAAAGAGTCATAAATTTTGGAATCATAAAACTAGCACCTACTTCACCTTTGTCCAATTCCTATTTGAAGAGCATCATGTGTGTAGTTACACACTT ACACTCACTACTTTAATAATAAAGTTCTGTAATATAATATAATATTAGCTGTTTATCCATCTAATTCCTT
• Tissue: pods
• Gene name: LI_gene_180210;
• Additional information: details;

Expression of Ll_transcript_516745

FPKM

• PAB: 1.2
• PNAB: 3.3
• PS1: 1.8
• PS2: 0.2
• PS3: 1.7
• PW1: 0.8
• PW2: 1.8
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516745

• Blastp: Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic from Capsicum with 84.23% of identity
• Blastx: Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic from Capsicum with 90.8% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450799.1)
• Pfam: 1-deoxy-D-xylulose-5-phosphate synthase (PF13292.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;