Ll_transcript_516753

Id TrinityTRINITY_DN50816_c2_g3_i5
Name TranscriptLl_transcript_516753
SequenceCCCCTTACATTTTTTCATTTCCTAAACTTCATTATTTATATTCATTTTTCATTTCATTACCTTCCACTTACTATAGTGTATGTCAATTACATAAACTAAT AACAAACTCATTCACCATATTTTCAATTTTCTCATATTTATATCTAGTTTGTGCATGTTTCTTTGAGTTTCTTTAGCTCTGAGTGATTTTGTTGTTTATT GCTATGGCTCTCTGTGCATTCTCATTTCCTGTTCATGTGAATCAATTAGCAGTTTTTTCTGATTCTATAAGATCAGTTGCTCTTGTTTCTCAATCTCAAT GGGGTGGCTTTCAATACCAACATAGGTTCAACCAGGTTAGGAGGTGTTTTATTCATGTAATTCATTAGAACTCTGTTCAATTATGTGTGTCAATGAATAC CCATGAAGGAAGTGGTGAAAAGATTATAACTTTGAAATTTGAACTCAATTCTGCTATATCTCTTGCTTGTTTATTTTTTGCTACAAAAATATATTTTTCT GGTTTTAGACTTTGATTCATATCGGCTTTATTTGTCTTCTTTTTATTTTTATTTTGTTTAGTTATTTTCAATTCTCAAAGAAATGGTTGTGTTGTTCTGA ATCCATATAGGTAAGAAAAAGGTCATGTGGGGTTAGTGCATCACTATCAGAGACTGGAAGGTATCATTCAGAAAGACCACCAACTCCACTACTTGACACT ATAAACTATCCAATTCATATGAAAAATCTCTCTACAAAGGAGCTGAGACAACTGGCGGATGAGGTGCGTTCGGATGTTATTTTCAATGTTTCTAAAACCG GGGGTCATCTAGGATCAAGCCTCGGCGTTGTTGAACTCACTGTTGCCCTCCACTATGTTTTCAATGCTCCCAAGGACAAAATCTTGTGGGATGTTGGTCA TCAGTCATACCCACATAAGATACTCACCGGTCGAAGGAATAGGATGCATACCATAAGACAGACAAATGGATTGTCTGGGTTTACGAAACGCGCTGAGAGT GAATTTGATTGTTTTGGCACTGGTCACAGCTCAACAACTATATCAGCAGGGCTGGGAATGGCTGTTGGGAGGGATCTGAAGGGAGAAAAGAACAAAGTAG TTACTGTTATCGGTGATGGTGCGATGACAGCTGGGCAAGCTTATGAAGCCATGAACAATGCCGGATATCTTGATTCCGACATGATTGTTATTCTAAATGA CAACAAACAGGTCTCGCTACCAACCGCTACTCTTGATGGGCCCACGCCACCAGTAGGTGCTTTGAGTAGTGCTCTCAGTAGGTTACAATCAAACAGGCCT CTCAGAGAACTGAGGGAGGTTGCCAAGGGAGTGACCAAACAAATTGGTGGCCCGATGCATGAGATAGCTGCAAAAGTTGATGAATATGCTCGTGGCATGA TCAGCGGTTCCGGATCAACACTATTTGAAGAGCTTGGACTTTACTACATTGGTCCTGTTGATGGTCATAACATAGATGATCTTGTTACCATTCTTAAAGA AGTTAAAAGTACTAAAATATCTGGTCCTGTATTGATCCATGTCGTCACTGAAAAAGGTCGTGGATACCCATACGCAGAAAAGGCATCAGACAAGTACCAT GGAGTTGCCAAGTTTGATCCAGCAACTGGAAAACAATTCAAAGCCAAGGCCGCCACCCAGGCCTATACAACATACTTTGCAGAGGCTTTGGTTGCGGAAG CTGAACTCGACAACGACATTGTTGGAATCCATGCTGCAATGGGAGGTGGTACTGGCATGAATATCTTCCATCGCCACTTCCCAAAACGATGCTTTGATGT TGGGATAGCAGAACAGCATGCTGTCACATTTGCAGCTGGTCTAGCTTGTGAAGGTCTTAAGCCTTTCTGTGCAATTTACTCATCATTCATGCAGAGAGCT TATGATCAGGTGGTGCATGATGTGGATTTGCAGAAGTTGCCTGTAAGATTTGCATTGGATAGAGCCGGATTGGTTGGAGCTGATGGTCCGACACACAGTG GTTCTTTTGATGTCACTTTTATGGCATCCCTCCCTAACATGGTGGTGATGGCTCCTTCCGATGAGGCTGAGCTTATCCACATGGTTGCTACTGCAGCTGC CATTAACGATCGACCAAGTTGTTTCCGATATCCAAGGGGAAATGGGATTGGTGTTGAACTACCACCAGGGAATAAAGGCATTCCTCTCGAGATCGGAAAG GGTAGGATCTTGATTGAAGGGGAAAGAGTGGCCCTTTTGGGCTATGGAACAGCTGTTCAGAACTGTTTGGCTGCTGCCTCCTTATTGAAACGTCACGGCT TGAATGCAACAGTAGCCGATGCACGTTTCTGTAAGCCGTTGGATAGTTCCCTCATTCGCAGCCTCGCAAAGTCACATGAGGTTTTGATCACTGTAGAAGA AGGATCAATAGGAGGATTTGGGTCTCATGTCGCTCAGTTTATGGCCCTTGATGGCCTTCTTGATGGAAAATTAAAGTGGAGGCCAATGGTTCTTCCGGAT TGTTATATTGAGCATGGATCATCTGAATATCAATTATCGGAAGCCGGTCTTACACCATTTCACATAGCAGCAACAGTCTTCAATGTACTTGGACAAACAA GAGAGGCACTGGAGGTCATGTCATAAAAGAAAAACAAAGGGGGTTCAATTTTCTCATTCCCTATATTGTACAAAGTAGCATAATTCACCTTTTGTAATAA TAATACAAAATAGCAATGTTAGCATAAGAGTTATGTTAGTAAACAATGCAGTTTGACAAATAGTAGTGCCAACTAGTTTTGAAGGACCAAGAATCCCATT TCCCCCCACAAAAGTCTAGAATTTCAAGTTTACTAGACCATAGCACATTTACAAAAAGGATAATTCTTGATTGTGATAGGTGATATTTATGTTGGACCAT ACTGTGTGACTGAGGAGCCTCCAATTACCAGAGAGTTCCATTGTTACTGAGGTATGAGGTATAGGAAGAGTGGAGAGGCACAAGAGAGACACTTCGTCTT GAACTAAAACCTTAAGAGATTAGTTCTTATAAACTTTTTCACTCTTCCTCACATATCCAATATGAGACTTCACACATGAATAAACCCAAGAATTT BLAST
Tissuepods
Gene nameLI_gene_180210; 
Additional informationdetails; 

Expression of Ll_transcript_516753

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_516753
BlastpProbable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic from Capsicum with 88.66% of identity
BlastxProbable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic from Capsicum with 87.63% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419459.1)
Pfam1-deoxy-D-xylulose-5-phosphate synthase (PF13292.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;