Ll_transcript_516760

• Id Trinity: TRINITY_DN50816_c2_g3_i9
• Name Transcript: Ll_transcript_516760
• Sequence: TCACATTCTCATTCTCATTCACTTCCTCTCTTCTCCTTTTCTTTATATAAACAAACTGCATTTACTCACTCTTCACTCATAACTTCTCTTTTCATCAACT TCTTCTGAATTCTCTGTCATGGATCTTCCTCCATTCTCATCTCCTCCTTTTCTCAACCACCAACTAACATCAATTCCTCCTCTTTCTTCTGCTCTCCATC TTCTCACTCATTTCCCACACACCCTCCACAAGGTGAAGAAAAGGGTAGGTGGGGTTTATGCATCACTATCAGAGAGGGGTGAGTATTATTCCCAGAGGCC ACCAACTCCACTATTGGACACTATCAACTATCCAATTCATATGAAAAATCTATCTACCAAGGAGCTGAAACAACTTGCCGATGAGCTGCGATCCGATGTT ATTTTCAGTGTTTCTAGAACTGGAGGTCATTTGGGCTCAAGCCTTGGTGTGGTGGAACTCACTGTTGCACTCCACTATGTCTTCAATACTCCTCAAGACA AGATTTTGTGGGATGTTGGTCACCAGTCTTATCCACATAAAATACTCACCGGTAGAAGGGATAAGATGCATACCATGAGGCAGACTAATGGATTATCCGG GTTTACAAAACGCTCCGAGAGTGAATATGATTGTTTTGGCACTGGTCATAGCTCAACAACTATTTCAGCTGGACTTGGAATGGCTGTTGGGAGAGACCTG AAGGGGAGAAAGAATAACGTAGTTGCTGTTATTGGGGATGGTGCTATGACAGCAGGGCAAGCTTATGAAGCCATGAACAATGCTGGATATCTTGATTCCG ATATGATTGTTATTCTAAATGACAATAAGCAGGTCTCGTTACCAACCGCAAATCTTGATGGACCCATACCGCCTGTAGGAGCTTTAAGTAGTGCTCTCAG TAGGTTACAGTCGAACAGGCCTCTTAGAGAATTGAGGGAGGTTGCCAAGGGATTAACTAAAAGAATTGGAGGTTCTATGCATGAATTGGCTGCAAAAGTT GATGAGTATGCTCGTGGCATGATCAGTGGTACTGGATCTACACTTTTTGAAGAGCTTGGACTCTACTATATTGGCCCAGTTGATGGTCATAATGTAGATG ATCTCATTGCCATTCTCAATGAAGTTAAAAGTACTAAAACAACTGGTCCTGTATTGATCCATGTTGTCACCGAAAAAGGTCGTGGATATCCATATGCGGA AAAGGCAGCAGACAAGTATCATGGAGTTACCAAGTTTGACCCAACAACTGGAAAGCAATTCAAAGCCAAGGCTAACACCCAGTCTTACACAACATACTTT GCGGAAGCTTTGATTGCAGAAGCAGAAGCTGACAAAGACATTGTCGCAATCCATGCTGCGATGGGAGGTGGTACTGGCATGAATCTCTTCCTTCGCCGTT TCCCGGCAAGATGCTTCGATGTGGGGATAGCAGAACAGCATGCTGTTACATTTGCTGCAGGTCTAGCTTGTGAAGGTATGAAGCCTTTCTGTGCAATTTA CTCATCATTCATGCAGAGGGCCTATGACCAGGTGGTGCATGATGTGGATCTGCAGAAGCTGCCTGTAAGATTTGCAATGGACAGAGCTGGATTGGTTGGA GCAGATGGTCCTACACATAGTGGTTCTTTTGACGTCACTTTTATGGCATGCCTCCCTAACATGGTGGTGATGGCACCTTCTGATGAAGCAGAGCTTTTCC ACATGGTTGCTACTGCAGCAGCGATTGATGATCGACCCAGTTGTTTCCGGTACCCGAGGGGGAATGGCATTGGTGTTGAGCTTCCAAGTGGGAATAAAGG CATTCCACTTGAGATCGGGAAAGGTAGAATACTGATTGAAGGGGAAAGAGTTGCCCTCTTGGGGTATGGATCAGCTGTTCAGAACTGCTTAGCCGCGGCT TCCTTAGTGGAACATCATGGTTTGCGCATAACTGTTGCCGATGCACGTTTCTGCAAGCCATTGGATCGTTCCTTGATTCGCAGCCTAGCAAAATCACATG ACGTGCTGATCACTGTTGAAGAAGGATCAATTGGAGGATTTGGATCTCATGTTGCTCAGTTCATGGCCCTCGATGGCCTTCTGGATGGCAAATTGAAGTG GAGGCCGGTGGTTCTTCCGGATCGTTATATTGACCACGGATCACCATCAGACCAATTGTCTCTAGCTGGTCTTACACCATCTCACATAGCAGCAACAGTG TTCAACATACTTGGACAAACAAGAGAGGCACTAGAGGTCATGTCCATGTCATAAAAGTAATACCAAGAAGTGATTTACTTTTCACTTTCCTACAATATAC AAAATATATGATTCACCACCATGTGTAATACAAAGGAGTGATGTTAGAATGTGAATTATTATGTAAGTGGATAATGCAGTTCTTCAAATAGTAATACCAA CTTCTTGTAATGTAAAGGGGAAAGAGTCATAAATTTTGGAATCATAAAACTAGCACCTACTTCACCTTTGTCCAATTCCTATTTGAAGAGCATCATGTGT GTAGTTACACACTTACACTCACTACTTTAATAATAAAGTTCTGTAATATAATATAATATTAGCTGTTTATCCATCTAATTCCTT
• Tissue: pods
• Gene name: LI_gene_180210;
• Additional information: details;

Expression of Ll_transcript_516760

FPKM

• PAB: 33
• PNAB: 32.4
• PS1: 36.2
• PS2: 14.9
• PS3: 34.3
• PW1: 32.3
• PW2: 50
• PW3: 48.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516760

• Blastp: Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic from Capsicum with 86.37% of identity
• Blastx: Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic from Capsicum with 90.77% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450799.1)
• Pfam: 1-deoxy-D-xylulose-5-phosphate synthase (PF13292.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;