| Id Trinity | TRINITY_DN50818_c5_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_514767 |
| Sequence | AAAAAGACAGGAACATGTGACATTGTATTGTGATTCAATTTGGTTTCTGCAAAAACACCAAAATCAGACCAACAAATGAAAGCGTTAGTGGCTGACTAGT AAAGTTACACAGCACAGACACAAACATAAACACAAACACAGGTGGACACACTATTTTCCGTTTCTCTTTCTTCTCACTTGTTCCTCTTCCTTCTCCAGAT TAGGGTTTTCTTCTCTCTTTATTTTCCCCTTCTTCTATAGTAAGCTTTATTTCTCTTCCGTTCTTTATCAATTATTATTATCAGCTTCTAATTCTTGCTC TTCTTGCCTTGGACTTACTTTGACTTCATTATTTATGACCTCTAAGCACCATTCATTTTTCTTTTTCTTCTTAATTTTTAACTTACTGTTCACGACTTTC CATTATTGTTTTTGTACCCTAATTACTATATCTTCGTTAATTAATTGCTCCTGATTTACTCTCAAGTTTTTTTTTCTATTTTTCTTTTAAATTCAATTTT TTTTTTCTTCAGATTTTCTATTTTGTTAGAGTATATAGTAGGTTGAAAATTTGGAGATCCTAGATAATTGCTTTTGCAAGTTGAAAATCTAAGGCTTGAA TTGTGCTTATGATCCCAACATTGGTTTTAATTCATGTGTAAAAATGCATCTCAATCTCACTTGAATTATCTTTGACTCTATGATATAAAGAGGGGGTTTA GAGTGTAGCATAAGCTTTAGGCAAATGTAGATAAACACTTGGAATGAGTTAGTAGTGAAAAGAGGTTTGGGTAGTCTTGTCATATATTCATTTATCTATA GTACCTGGAAGCTGGAAGTACTATTTGAGGAGGGCCTCAGCAATATGGCTGTAACATTGTTGTTTAGGTGATGTTTATCCGAGCATTTTGTGTTCAGACC ATTAGAATCTAATAACAATCATCCTTAGTACCCACTTTTTTGTCATTCTTTTCGGATATGCTTTTATACTTTATCCCCTTTCTCAGTACTATTGTTATTA ATTTGTTCCTGATTTATGTTTGTGTATTGCTCCCACCGAGGTTCTGAATTAACAATAATGATTGATATAATATCAGCATAGTTTTATTAACTTTAAATGC TTCTGTTTTTCTTTGCTGTGTTAACTGCTTACCACATTACTACCATGCTAGCATGAATGTTTTGAGATATGATTTATAAAATCAGGACGAGTTCATGATT TGTAATATTTCTATAGTTGTTTCTCTGGTAACTCTAGTTGCTATACTATCATGACATCTGAGTCTGACATGCACAACACACATGGAAGTGATCTAGATCC TAAATGATGATTAATTCATAGATCCTCCCTCCCCTAATTCGCTGTTGTTGCCCCGCATGCTTAGAGCTTACACATTATTTCCGAATTTCATTTCAGATAC ACTTTAGCACTTAATATGTGAATCTGTTATGTAGTTCACATTGTCTGCTACTTGAATTAATTGTAGAGTTACTAAGCCTTATTCTTGTATAGGGATAATT TTGATGAAGCATCTGCTATAAGTGTACAATCCCTATGCATAAGTATGGAACCATGGCAAAATTTTGTTTGATTAACCAAGTGCTGTATTGGTTGAGGAAG CCTAGAGTGAATATTTAGCTTTGTGTACCATTTGTGGGTTTCTGATGGATGATCCTGGGCATCGTGAAAATGGAAGGCACAAACCAGATCAATATAAATC TGGTCAAGGACAGTGGTTGATGCAACACCAGCCTTCCATGAAGCAGATTATGGCACTTATGGCTGAAAGAGATGCAGCCATTCAAGAAAGAAGTTTGGCT CTTTCTGAGAAAAAGGCAGCACTTGCAGAGCGTGACATGGCATTCCTGCAGCGAGATACTGCAATTGCAGAACGAAATAATGCAATTATGGAACGAGATA ATGCAATTGCAGCTCTTCAGTATCGAGAGAGCTCATTAACTAGCGGAAGCATGCCATCCTGTCCTCCAGGATGCCAAATCTCACGTGGTGTCAAGCATAT ACATCATCCCCAGCAACAGGTACACCAATTACATAATATGGGTGATACTTCTTACGGCGCACGGGATATCCACACAACTGATGCTCTCCCAGAATCACCC ATCCCTTTGGAGGCTGGGAAACCACGACGAGCCAAGCGACCAAAGCAAGCGAAATCAATTTCACCAAACAAGAAGATTTCAAAAACTGCAAGAAAAGTCA AGATGGAGAGCGAAGACTTGAATGACATGATGTTTAGCAAGATGCGCGAATGGAAGAATGGCCAAGAAATGTTTAATGGAGGCGATGATCTTAACAAGCA GTCAGTGGTGTCAAAGGCTGATTGGAAAGGCCAGGACTTGGGGTTGAATCAAGTGGCATATGACGAGTCTACCATGCCGGCTCCATTTTGCTCTTGTACT GGTGTTCTGAGGCAGTGCTACAAATGGGGCAATGGGGGTTGGCAGTCTGCTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_180223; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_514767
| Blastp | Protein BASIC PENTACYSTEINE6 from Arabidopsis with 58.3% of identity |
|---|---|
| Blastx | Protein BASIC PENTACYSTEINE6 from Arabidopsis with 56.64% of identity |
| Eggnog | GAGA-binding transcriptional activator(ENOG41120EV) |
| Kegg | Link to kegg annotations (AT5G42520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415252.1) |
| Pfam | GAGA binding protein-like family (PF06217.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |