| Id Trinity | TRINITY_DN50819_c2_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_515159 |
| Sequence | CTTGTTACATCGTTTTAATTTGTATCATCTTAGAAAGTTGGAGATCTAAAAAATAAGTTTGATATGTTTTTTACCTGGTTACTTCATATTATGTATTTCT AATTTATATTTCAGGAAATAATAATCCACTGGTGGTTGTGGGTGGGATTCTGCTCCACCTAAAATCTCTGAGGAAGTTTGAATACACTGGTGGTTGGATC GCCGAAGAAAACAAGGAATGAAAGGATGCACCTGATGACCACGGTGGAGCTTGTGAAACCAAGCAGAGAACGAAAGGAGAAGAGGCTTTTATTTCATATA CAGAACATTTGAATGCAATTGAGAGTGGTAGAGTTGAAAATGTCCCTGCTCCTACTATTGCAATTGATTACTAGAGGCTTCCAAATGATGCAACTGTTGA GGATACTGTAATCGTGATTCGTGATTCGTGCTGATGAGGCTCACCATAGGGATGTGAATCACTTTGCTTAGAATTGAATGAGGCTCCAGCTCCTATTGGT TATCATTGAGTCATATTTTGTCATTTTGAGACTAAACACCTAAAAGTAAGTTTTATCTCATCATCATTTTAATGAAGTCTTTATTCATGCTCAAGATGCT TAAATTACATTTTAATGATTCTCAGTCATGCATATGACATTAGCATTTATTATGATTAATATGATATTATCAAAGTCAGCCTCACATGATAGTTTTGTTG TATTAATTCATCTCAAAGCTCCTCCTTCAGGGAGAAAACAAAATGGTGGCGGAAACAATACAGAACAACCTCCATCGGATCAAAATTCACGTGCTTCAGT TGACCTAGTTACAGTTCTCGATGTAAGTGGTAGCATGGGAGGTACTAAGCTTGCACTGTTAAAGCGAGCTATGGGCTTTGTCATACAGAACCTGGGTCCA TCAGACCGGCTGTCTGTAATTGCCTTCTCCTCCACAGCGCGACGCGTTTTCCCTCTTCGGCAGATGACTGACACTGGTCGACAGCAGGCATTACAAGCTG TCAATTCCTTGGTTGCCAATGGTGGTACAAACATTGCTGAAGGATTGAGGAAAGGCGCTAAGGTGTTTGTTGACCGCCGATGGAAGAACCCAGTTAGCAG CATCATATTACTATCTGATGGGCAGGATACATACACAGCCAGTAGCAGGCCAAATGTTGAAACAAATTACCAGTTACTTGTCCCAAAATCCATCCATCGC AATAATGGTACAGGCTTGTCAATACCTGTGCATGCATTTGGCTTTGGATCAGACCATGATGCTACTTCAATGCATTCAATCTCTGATATATCTGGTGGTA CATTTTCTTTCATTGAAACTGAGGATGTGATTCAGGATGCATTTGCACAATGTATCGGTGGGCTCTTGAGTGTGGTGGTGCAAGAATTACAGGTCAAAGT TGAGTGTGTTCATCCTAGTCTCCAACTTGGTTCAGTAAAAGCAGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_180235; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_515159
| Blastp | Uncharacterized protein sll0103 from Synechocystis with 33.51% of identity |
|---|---|
| Blastx | Alternative oxidase 3, mitochondrial from Soja with 43.98% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (sll0103) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448747.1) |
| Pfam | VWA domain containing CoxE-like protein (PF05762.13) |
| Rfam | - |
| GO | - |