Ll_transcript_515164

• Id Trinity: TRINITY_DN50819_c2_g1_i14
• Name Transcript: Ll_transcript_515164
• Sequence: TAAAAGTTATGTGATTTGTCGGATTCAACTATTCAACTCATAAGTTAAGTTCAACACGTTTCCTTCCAAACTATAGACAGCTCAACTTGATCAAAGCAAT ATTTGACTACTCATTTAATAACAGGTACTACTCTGCTAACAGAGTCTTGGATCCACACAAATATCACAAATCTAATGGCTCGTTGATGTGAAGAAAACAT TTTACTGGCTATATTTAATTGAAGTAATATTCATTTCCACCTCTAACTTCTGACCCCACTCACCCTCTTTCTATCTTCATCCATTAATACACACAGAAGT TAAAAAAGCCAAACTTTCCTTCTCTCATTATCTACAACACAACACCATTTTCTTCTCTTCTCTACTCTCTCCTTACCCATTTCCACTCATAGCATGTTTG CCCACGGTCACAACAAAGTTCAAATCTTTCATTCACACACACTCATCTCTGAGTTTTTCACCTCTTAGGGTCACTCATTGAAGTTCTGATTGTAAACAAG AACAGAAGGAAATGGGAAGCCAATGGAGAAAAGTGAAGCTTGCACTTGGGTTCAATACTTGTGTTCACATTCCTAGAGATTTTGATGATTCTTCCTCATC CCTCAACTCTGCCCCAGAAAGGTTTTCCGGCAGTATCTCATCCTCCGATGTTGTCACGCCGGCCGGTGACCGCCGAAGCACTTCTAGACCATCCTCCTCC GGTCTCCGGTTACCCAAATCAGGACCCAAATCCCCTAAGGGGACTTGTGCAATATGCCTGAACATCATGAAACCAGGGCAGGGTCATGCCATTTTCATTG CAGAATGTTCTCACTCTTTCCATTTCTACTGTATCACTTCTAATGTAAAACACGGGAACCAGAATTGCCCTGTCTGCAGAGCAAAATGGAAAGAAGTTCC TTTTCACAGTCCCGCTTTTAATGTCCCCCATAACATGGCTCGAATCAACCCACTAACTCCTCGTGATGATGACTGGACAACTCTCTTAAGAATTCCTTCT CAACAACTCGATGCAGGTCGGCCGAGTTCATCACTTAATCATGCTCCTGAGCCAGCAATCTTTGATGATGATGAAGCCCTGGATCAACAAAATTCAAATA CCCACAATAAAAATGAGGATGATCACGATATAGTAAGTACATTGGAGATCAAAACATATCCTGAAGTTTCAGCTGTTCCAAAGTCAGCCTCACGTGATAA TTTTGCTGTATTAATCCATCTCAAAGCTCCTCCTTCAGGAAGAAACCAAAATAAGGGCGGAAACAATGCAGAAGAACCTCCTTCGGATAAAAAATCTCAT GCTGCAATTGATCTAGTTACAGTTCTCGATGTAAGTGGTAGCATGGGAGGTACTAAGCTTGCGCTTTTAAAGCGAGCAATGGGCTTTGTCATACAGAATC TCGGTCCATCAGACAGACTGTCTGTCATTGCCTTCTCCTCAACAGCGCACCGCATCTTTCCTCTTCGGCTAATGACTGATACTGGACGGCAGCAGGCATT GCAAGCTGTCAATTCATTGATTGCCAACGGTGGTACAAACATTGCCGAAGGCTTGAGGAAAGGCGCCAAGGTATTTGTTGATCGCAGGTGGAAGAACCCA GTTAGCAGCATCATATTGCTATCTGATGGAAAGGATACATACTCAGTCAGTAGAGGTCCAAATGTTGAAACAAATTACCAGTTACTTGTCCCGGACTCAA TTCATCGCAATAATAGCACAGGCTTGCATATACCTGTGCATGCATTTGGCTTTGGCTCTGACCATGATGCTGCTTTAATGCATTCAATCTCTGAGATATC TGGTGGTACATTTTCTTTCATTGAAGCTGAGGATGTGATTCAGGATGCATTTGCACAATGTATTGGGGGACTCTTGAGTGTGGTGGTGCAAGAATTACAG GTCAAAGTTGAGTGTGTTCACCCTAGTCTGCAACTTAGTTCAGTAAAAGCTGGAAGTTACCAAACAAGCTTGACGGACAATTCTAGAATGGCTTCTATTA ATGTTGGAGATCTGTATGCTGAAGAAGAAAGAGACTTTTTGGTGACAGTCAATGTTCCAGTTGATGGTTCAAGTAGTGAGATGTCATTGTTGATTGTTCG AGCTCTTTATAGAGACCCCATAACAAAAGAAATGGTGGATTTGGAAGAAAACAGTGAAGTAAAAATTCAGCGTCCCGACAATGTAGGTACAGCAGAACTA GTTGTGTCAATAGAAGTAGACAGACAGCGAAACAGGCTTCTTGCAGCTGAGGCAATGGCCGAGGCAAGAGTCGCAGCCGAGCGTCATGATTTATCTGCTG CAGTTTCTATCCTGGAGAATTGTCACAAGGCATTGTCTGAAACTGTTTCTGCCCGAGCCGGGGATAGCTTATGTCTTGCTCTTTCTGTTGAATTAGAG
• Tissue: pods
• Gene name: LI_gene_180235;
• Additional information: details;

Expression of Ll_transcript_515164

FPKM

• PAB: 5.8
• PNAB: 3
• PS1: 5.3
• PS2: 1.9
• PS3: 2.4
• PW1: 5
• PW2: 4.4
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_515164

• Blastp: Uncharacterized protein sll0103 from Synechocystis with 27.78% of identity
• Blastx: Uncharacterized protein sll0103 from Synechocystis with 26.59% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (sll0103)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448746.1)
• Pfam: Anaphase-promoting complex subunit 11 RING-H2 finger (PF12861.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;