Ll_transcript_515150

• Id Trinity: TRINITY_DN50819_c2_g1_i6
• Name Transcript: Ll_transcript_515150
• Sequence: CACTATCCTACGTTAATCCATTAACACACACAAACATTAAAAAACTAATCTTTCTTACTATTTCTCCCTTTCATCGATTACAACACCATTTCTTCACTTT CTCCTTACCCATCTTCATTCATTGCATGTTTCCACAGAGCCACAACAAAGTTCAAATCTTTCATCCACTCCGAGTTTCTCACCTCTTTGGGTCACTCCTC CAATATCTGATTCTCAAAAATAGCAACAAAAATGGCAAGCCAATGGAGAAAAGTCAAGCTTGCATTTGGACTCAATACTTGGGTTCACATTCCTACAGAT TTTGATGATTCTTCTTCATCCCTCAACTCCACCGCCGCAAGGTTTTCCATCACCACCTCACCCTCCGCCGTTGTCTCGCCGGCCGGTGACACCTCCGGTT ACTGCCCAACCACTCCTACACCATCTTCCTCTTGTTTCTCGTTACCCAAATCTGAATCCAAATCTTATGAGACTTGTGCAATATGCCTGAACATAATGAA ACCAGGGCAGGGCTATGCCATTTTTACTGCAGAATGCTCCCACTCTTTCCATTTCCACTGCATCATTTCTAACGTAAAACATGGGAACCAGACTTGTCCT GTCTGCAGAGCAAAATGGAAAGAAGCTCCTTCTCATAGTCTTGCTTTTAATGTCCCCCAGGACATGGCTCAAATCAACCCAGTAACTCCTCGATATGATG ACTGGACAACTCGCTTAAGGAGGTTTCCTTCGCAACAAGTTGGTGCAGGTTGGCAGAGTTCATCGCTTAATCATGTTCCTGAGCCAGCGATCTTTGATGA TGACGAAGCCCTGGATCGACAAAATTCAATTACACACGATAAAAATGAGGATGATCACAATATAGTAGGTACATTGGAGATGAAAACATATCCTGAAGTT TTAGCTGTTCCAAAGTTAGCCTCTCGTGATAACTTTGGTGTATTAATCCATCTCAAAGCTCCTCCTTCAGGAAGAAACCAAAATAAGGGCGGAAACAATG CAGAAGAACCTCCTTCGGATAAAAAATCTCATGCTGCAATTGATCTAGTTACAGTTCTCGATGTAAGTGGTAGCATGGGAGGTACTAAGCTTGCGCTTTT AAAGCGAGCAATGGGCTTTGTCATACAGAATCTCGGTCCATCAGACAGACTGTCTGTCATTGCCTTCTCCTCAACAGCGCACCGCATCTTTCCTCTTCGG CTAATGACTGATACTGGACGGCAGCAGGCATTGCAAGCTGTCAATTCATTGATTGCCAACGGTGGTACAAACATTGCCGAAGGCTTGAGGAAAGGCGCCA AGGTATTTGTTGATCGCAGGTGGAAGAACCCAGTTAGCAGCATCATATTGCTATCTGATGGAAAGGATACATACTCAGTCAGTAGAGGTCCAAATGTTGA AACAAATTACCAGTTACTTGTCCCGGACTCAATTCATCGCAATAATAGCACAGGCTTGCATATACCTGTGCATGCATTTGGCTTTGGCTCTGACCATGAT GCTGCTTTAATGCATTCAATCTCTGAGATATCTGGTGGTACATTTTCTTTCATTGAAGCTGAGGATGTGATTCAGGATGCATTTGCACAATGTATTGGGG GACTCTTGAGTGTGGTGGTGCAAGAATTACAGGTCAAAGTTGAGTGTGTTCACCCTAGTCTGCAACTTAGTTCAGTAAAAGCTGGAAGTTACCAAACAAG CTTGACGGACAATTCTAGAATGGCTTCTATTAATGTTGGAGATCTGTATGCTGAAGAAGAAAGAGACTTTTTGGTGACAGTCAATGTTCCAGTTGATGGT TCAAGTAGTGAGATGTCATTGTTGATTGTTCGAGCTCTTTATAGAGACCCCATAACAAAAGAAATGGTGGATTTGGAAGAAAACAGTGAAGTAAAAATTC AGCGTCCCGACAATGTAGGTACAGCAGAACTAGTTGTGTCAATAGAAGTAGACAGACAGCGAAACAGGCTTCTTGCAGCTGAGGCAATGGCCGAGGCAAG AGTCGCAGCCGAGCGTCATGATTTATCTGCTGCAGTTTCTATCCTGGAGAATTGTCACAAGGCATTGTCTGAAACTGTTTCTGCCCGAGCCGGGGATAGC TTATGTCTTGCTCTTTCTGTTGAATTAGAG
• Tissue: pods
• Gene name: LI_gene_180235;
• Additional information: details;

Expression of Ll_transcript_515150

FPKM

• PAB: 6.8
• PNAB: 0.6
• PS1: 1.2
• PS2: 1.5
• PS3: 0.7
• PW1: 0.3
• PW2: 0.6
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_515150

• Blastp: Uncharacterized protein sll0103 from Synechocystis with 27.78% of identity
• Blastx: Uncharacterized protein sll0103 from Synechocystis with 26.59% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (sll0103)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413968.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;