| Id Trinity | TRINITY_DN50827_c1_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_516640 |
| Sequence | GAAGAATATAAATACTAATTTTTGCAAGTTTCAATTCATAAGTGAAATCGAATTAAAGCTTTTATTTAGTTTAATTTGAGATTCTAAGCTTCAGAAAAGA GCAACGGGTCCCTCTACTCTCATCAACAATACCCATAAACAAAACCCTCTACTTTTATGTGTTACAAGTTCCTCAATTTTTGGTTAATAAGATTTTTGAC ATAAACTTATATTGATACTTATTAATTTGTGTTTTTGGGTTCAATTTACAGTGGTTTTGGAAAATGGGTATGTGATGATTTTAGTGGAGTGGGTTTAGGG TTTTAACATTGTCAGTTATGTTTTTTTGTTGAATCTGTTGGTGAATTTTGCTCTTTTGTTTTTGTGGGGTGCTGGGAATTGTGATAAAGTTTCAGTCTTT GAGGAAGAGATTGGGAATAAGCTGCATTGTTGAATCAATTTTGGTACCAAAAAAGCTCTTTATTGTTCTGTAGTTGTTAGGATTTTGAAGCATCACTGGT GCTGCTTGATGATTTCAATTGACCTTAGATTTGTTCCGAACTTGATTGTTGAGTTGTTTGGTTTCAAGGTTTTGATTGAGTAAAAATGGCTTGTGTGAAA TTGGGTTCCAAGGTTGATGCGTTCCAGCGTCAAGGGCAAGCCTGGTTCTGCACAACTGGGCTTCCCAGTGATTTAGTTGTTGAAGTTGGTGAAATGTCCT TCCATCTTCACAAGTTCCCTTTGCTATCAAGAAGTGGTGTTATATCCAGATTGATTACCGAAACTCCAGAATCAGAGGAAGAATGTGTCATACACCTCCC CGGTATTCCTGGCGGGGCCAAAACCTTTGAACTTGTAGCAAAATTCTGCTACGGCGTGAAACTTGAACTTACAGCATCAAATTTTGTTAATCTCTGGTGC GCTGCTGAGCATCTTGAAATGACTGAGGAGCATGGTGAAGGTAACCTCATTTCACAAGCTGAAACCTTTTTCAATCAAGTGGTCGTCCGAAGTTGGAAAG ACTCTGTAAGGGCACTTCAAACCTGTGATGATGTTCTTCCCCATGCTGAAGTACTCCACATTGTGAAAAGGTGCATTGAATCACTTGCAGCTAAGGCATC TACAGACCCAAATTTGTTTGGATGGCCTGTATTGGAGCGCGGTGGGCCGATGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACCGGGGCA AGACCAAAGAATCCAAGTTCGGATTGGTGGTATGAGGATGTAGCAAATTTGAGTTTACCTCTTTATAAGAGGTTGATAGCTGTGATGGAATCACGGGGCA TTATGCTAAAAGGTACCTGCCAGGGTTAAATCGACGACATGCCTCCAGTGACTCCAGTACCCATCTGACACCAGTCACTGCGGGGTCTCCACCGTCTGAA GAAGACCAGAAGATTCTTGTTGAAGAGATTGATCGGTTACTCCCAATGGAAAAGGGCCTGGTCCATACAAAGTTCCTGTTCAGTCTACTTCGAACAGCCA TGATTCTTCGAGTGAGCCACTCCTGCATGTCAAATTTGGAGAAACGGATCGGGATGCAGCTTGATCAAGCTACTTTGGATGATCTCTTGATCCCTACTTT CTCATATTCAATGGAGACACTTTACAACATTGACTGTGTGCAAAGAATTCTCGATCATTTTCTTACGATGGATCAGGTTACAGGTGCTGCATCTCCATGT TCAATTGATGACGACCCATTGATTGGATCACCTTCGCTGACACCAATCACCATGGTAGCCAAGCTGATTGATGGTTTCCTGGCCGAGGTTGCTCCTGATG TTAACTTAAAGTTTCCCAAGTTCGAAGCCCTTGCTGCTGCTGTTCCCGAGTATGCCAGGCCTTTGGATGATGGCCTATACCGCGCCTTAGACATTTATTT GAAGTCTCACCCTTGGTTGGTGGAATCCGAGAGAGAGCAGCTATGTAGGCTGATGGACTGCCAGAAACTCTCCTTAGAAGCTTGCACCCATGCAGCACAG AACGAGCGGCTACCTGTAAGAATAATAGTTCAAGTTCTATTTTTCGAGCAGCTCCAACTCCGGACTTCAATTGCCGGTTGCTTTCTAGTCTCAGATAATC TTGATGGATCAAGGCAATTAAGAAGTGGTCTGATTGGAAACAATGAGGGTGGTTGGGCATCTGCCGTGAAGGAGAATCAGGTTTTGAAAGTCGGAATGGA TAACATGAGGCTGAGGGTATCTGACCTTGAGAAGGAGTGCTCAAACATGAGACACGAGATCGAGAAATTGGACCGTGCAAAGGGATCAAGCAAGTGGGCA GCCGTCTCGAAGAAACTCGGGTTTAAGATAAAGTCTCAGATGTGCAGTGCTGAAGAAGGATCAGTTAGTAATCAGAAGAATAGTGGAAATAGTAAGATTG AGAAGTTGAAGGACAGACATATAGTAAAGCAGAAGAAAAATTCTTCTATTAGTGACAAAGAATCTGTTTCTTCAATTGTTTTTTCTTAGTGTTCTATAAG GTTACTATGTCATATCTTGAATAGTTTCTTTGTCTCTGCAATCTGCATCACAAAGTTCCACTATGCTGTGTAATGTAAACTGTAGTTTTAACTTTTTCTT ATTATGTCCAGATGTCTATGCATATAAAGTGTTCATGCCACTTCTACTTCAAAATACTCATTTGCTGCACCTTAGGTAATAACTAATCTCATTCGGGTGG TTGTTATTCCTAAAAAAATGAACTCTCGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_180297; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_516640
| Blastp | BTB/POZ domain-containing protein At1g30440 from Arabidopsis with 69.04% of identity |
|---|---|
| Blastx | BTB/POZ domain-containing protein At5g03250 from Arabidopsis with 54.55% of identity |
| Eggnog | BTB POZ domain-containing protein(ENOG410ZHWZ) |
| Kegg | Link to kegg annotations (AT1G30440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415117.1) |
| Pfam | NPH3 family (PF03000.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |