Ll_transcript_516641

• Id Trinity: TRINITY_DN50827_c1_g1_i12
• Name Transcript: Ll_transcript_516641
• Sequence: GGTACTAGGAATTGTGATAAAGTTTCTGTCTTTGAGGAAGAGATTAGGAATAAGCTGCATTGTTGTTGAATCAATTTAGAGGTTGTAGGAAAGTGTTGGT ACTAGAATAGCTTTAGTGTTTTATTCCTTGGTTTTTGTTCCTTGTGGATGCAAAGGTTGTTACTTTTTGAAGCCAATTGCTTCGGCTGTTGTTAGAATTA GGGAACATCATTTTGTGCTGCTTGAAGATTTCAATTGACCTTAGATCTGTTTCTGAACTTGGTTTTTTAGTTGTTCCGTTTCTCGGATTTGACTGAGTAA AAATGGCTTGTGTGAAATTGGGTTCGAAAGCTGATGCATTCAAGCGTCAAGGGCAAGCTTGGTTCTGCACAACCGGGCTTCCCAGTGATCTAGTTGTTGA AGTTGGCGAGATGTCCTTTCATCTTCACAAGTTCCCTTTGCTATCTAGAAGTGGTGTTTTGTTCAGATTGATTACTGAAGCTTCAGAATCAGAGGAAGAG GAAGAATGTGTCATACACCCCCCGGATATTCCTGGCGGGGCCAAAACCTTTGAGCTTGTGGCAAAATTCTGCTACGGTGTGAAACTTGAACTTACAGCAT CAAATGTTGTGTATCTCTGGTGTGCTGCTGAGCATCTTGAAATGACTGAGGAACATGGTGAAGGCAATCTTATTTCACAAGCTGAAACCTTTTTCAATCA AGTTGTCCTCCGAAGTTGGAAAGACTCTCTAAGGGCACTTCAAACCTGTGATGATGTACTTTCCCATGCTGAAGCGCTCCACATTGTGAAAAGGTGCATT GAATCGCTTGCAGCAAAGGCATCCACTGACCCAAATTTGTTCGGATGGCCTGTACTGGAGCGTGGTGGGCCCATGCAGAGCCCTGGTGGAAGTGTTTTGT GGAATGGAATAAGTACCGGGGCAAGACCAAAGAATCCAAGTTCGGATTGGTGGTATGAGGATGTAGCAAATTTGAGTTTACCTCTTTATAAGAGGTTGAT AGCTGTGATGGAATCACGGGGCATTATGCTAAAAGGTACCTGCCAGGGTTAAATCGACGACATGCCTCCAGTGACTCCAGTACCCATCTGACACCAGTCA CTGCGGGGTCTCCACCGTCTGAAGAAGACCAGAAGATTCTTGTTGAAGAGATTGATCGGTTACTCCCAATGGAAAAGGGCCTGGTCCATACAAAGTTCCT GTTCAGTCTACTTCGAACAGCCATGATTCTTCGAGTGAGCCACTCCTGCATGTCAAATTTGGAGAAACGGATCGGGATGCAGCTTGATCAAGCTACTTTG GATGATCTCTTGATCCCTACTTTCTCATATTCAATGGAGACACTTTACAACATTGACTGTGTGCAAAGAATTCTCGATCATTTTCTTACGATGGATCAGG TTACAGGTGCTGCATCTCCATGTTCAATTGATGACGACCCATTGATTGGATCACCTTCGCTGACACCAATCACCATGGTAGCCAAGCTGATTGATGGTTT CCTGGCCGAGGTTGCTCCTGATGTTAACTTAAAGTTTCCCAAGTTCGAAGCCCTTGCTGCTGCTGTTCCCGAGTATGCCAGGCCTTTGGATGATGGCCTA TACCGCGCCTTAGACATTTATTTGAAGTCTCACCCTTGGTTGGTGGAATCCGAGAGAGAGCAGCTATGTAGGCTGATGGACTGCCAGAAACTCTCCTTAG AAGCTTGCACCCATGCAGCACAGAACGAGCGGCTACCGATCAGAACAATAGTTCAAGTTCTATTCTTCGAGCAACTCCAGCTCCGGACTTCAATTGCTGG TTGCTTTCTAGTTTCAGATAATCTTGATGGATCGAGGCAATTAAGAAGTGGTTTGATCGGAAATAACGAAGGTGGCTGGCCATCCGCCGTGAAAGAGAAT CAGGTTTTGAAAGTGGGAATGGATAACATGAGGATGAGGGTATCCGAGCTTGAGAAGGAATGCTCAAACATGCGGCAGGAGATCGAGAAGGTTGGTCGCG GAAAGGGATCAAGCAGTTGGGGAATATTGTTTAAGGTGTTTAAGATCAAATCTCAGATTTGCAGTGCTGAAGATGGATCAGTTAGCAACCAGAATAATGG AAATAGTAAGGTTGAGAAGTTGAAGAAAAGACTTGAAGTAAAACACAAGAAAAGTTCTTATATTAGTGATAAAGAATCAGTCTCTTCAATTGTTCCTTCT TAGTGTTCTACATGTTCATTTACTCAAAAGGTTTCTTTCCATTATGTTACCATGTCACAAACTGATATGGATGAGATATTGCGGATGTGGAAATGGTTGT GGTAATTGTTATTGCAGTTGTTGAGATTCGGATTGTGGCATGAAAATATTTTAATTTCATAAATTGAAAAAATCTTTAATTATTGTAACTTGTACTATAT TTTTAATTCAACAGTTTATGCACTAAACCATTGGGTGGCATGGATATTATGGATGTTGGCCATGGTTTTTATGTGGTTAATGAAGGCCATGTTAGAAGGC CCG
• Tissue: pods
• Gene name: LI_gene_180297;
• Additional information: details;

Expression of Ll_transcript_516641

FPKM

• PAB: 0.1
• PNAB: 0.8
• PS1: 0.6
• PS2: 0.5
• PS3: 1.2
• PW1: 1.5
• PW2: 1.3
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516641

• Blastp: BTB/POZ domain-containing protein At1g30440 from Arabidopsis with 68.51% of identity
• Blastx: BTB/POZ domain-containing protein At1g30440 from Arabidopsis with 65.49% of identity
• Eggnog: BTB POZ domain-containing protein(ENOG410ZHWZ)
• Kegg: Link to kegg annotations (AT1G30440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437540.1)
• Pfam: NPH3 family (PF03000.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;