Ll_transcript_516629

• Id Trinity: TRINITY_DN50827_c1_g1_i3
• Name Transcript: Ll_transcript_516629
• Sequence: ATCCATGATCGCTCATAATGTTCTATCGCATTTGCCAAAACGGGTTTTCAACTCATAAGTCCAACAAAACTAACGCTTTAATTTAATTAGAGATTCTAAC TCTAAGCTCGAAAAAAGAGCAATGAGTGTTTTTTAAGGTAAATGACCCAACATGTGCTGGATTGCTATAATGTGATTCATGGTACCCACTGTCCCATAAA CACATGCTTCCAATTTTTTGTGTTACAAAGGAGTCAATGCTTTCGTATAACAACAATTCATTTTTTGGGTTGTTGACCTAAACTTAGGTTGAAGATAAGG AATTTGTGTTTTTGGGTTCAATTAATATTGGTTTTAGCAAGTGGGTATGTGCTGATTTTATTGGACTGGGTTTAGGGTTTCAGCTTTTTTAGTTACTTTT TTTATTGAATCTGGTTGTGGATTTTGCTCTTTTGTTTTTGTGGGGTGCTTGTAATTGTGATATAGTTTCTGTCTTTGAGAAAGATATTTGCAATTGCAAT AAGCTGCATTTTTTAACCAACTTCCATTTTGTAGGAAAATTTTGGTACCATTTTAGCTTTTAGTGTTGTTTGGTTTCTTGTTGATTCAAACATTGTTCTG GTTTGAGGCCCATTGTTTTATTAGTTGTCAGAATCTGGAAGCATATTTTGGTGCTGCTTAAGGATTTACCTTAAATTTGTTCTGAACTTGGTTTTTGAGT TGTTCTGTTTCTGGGATTTGGCTGTTTAAATGGCTTCTGTAAAATTTGGTTCCAAGGCTGATGCGTTCCGGCGTCAAGGGCAAGCATGGTTCTGCACAAC CGGGCTTCCGAGTGATTTAGTTGTTGAAGTTGGTGAGATGTCCTTCCATCTTCACAAGTTCCCTTTGCTATCTAAAAGTGGGGTTTTGTTCAGATTGATT ACCGAAGCTTCAGAATCAGAGGAAGAGGAAGAATGTGTCATACACCCCCCGGATATTCCTGGCGGGGCCAAAACCTTTGAACTTGTAGCAAAATTCTGCT ACGGCGTGAAACTTGAACTTACAGCATCAAATTTTGTTAATCTCTGGTGCGCTGCTGAGCATCTTGAAATGACTGAGGAGCATGGTGAAGGTAACCTCAT TTCACAAGCTGAAACCTTTTTCAATCAAGTGGTCGTCCGAAGTTGGAAAGACTCTGTAAGGGCACTTCAAACCTGTGATGATGTTCTTCCCCATGCTGAA GTACTCCACATTGTGAAAAGGTGCATTGAATCACTTGCAGCTAAGGCATCTACAGACCCAAATTTGTTTGGATGGCCTGTATTGGAGCGCGGTGGGCCGA TGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACCGGGGCAAGACCAAAGAATCCAAGTTCGGATTGGTGGTATGAGGATGTAGCAAATTT GAGTTTACCTCTTTATAAGAGGTTGATAGCTGTGATGGAATCACGGGGCATTATGCTAAAAGGTACCTGCCAGGGTTAAATCGACGACATGCCTCCAGTG ACTCCAGTACCCATCTGACACCAGTCACTGCGGGGTCTCCACCGTCTGAAGAAGACCAGAAGATTCTTGTTGAAGAGATTGATCGGTTACTCCCAATGGA AAAGGGCCTGGTCCATACAAAGTTCCTGTTCAGTCTACTTCGAACAGCCATGATTCTTCGAGTGAGCCACTCCTGCATGTCAAATTTGGAGAAACGGATC GGGATGCAGCTTGATCAAGCTACTTTGGATGATCTCTTGATCCCTACTTTCTCATATTCAATGGAGACACTTTACAACATTGACTGTGTGCAAAGAATTC TCGATCATTTTCTTACGATGGATCAGGTTACAGGTGCTGCATCTCCATGTTCAATTGATGACGACCCATTGATTGGATCACCTTCGCTGACACCAATCAC CATGGTAGCCAAGCTGATTGATGGTTTCCTGGCCGAGGTTGCTCCTGATGTTAACTTAAAGTTTCCCAAGTTCGAAGCCCTTGCTGCTGCTGTTCCCGAG TATGCCAGGCCTTTGGATGATGGCCTATACCGCGCCTTAGACATTTATTTGAAGTCTCACCCTTGGTTGGTGGAATCCGAGAGAGAGCAGCTATGTAGGC TGATGGACTGCCAGAAACTCTCCTTAGAAGCTTGCACCCATGCAGCACAGAACGAGCGGCTACCTGTAAGAATAATAGTTCAAGTTCTATTTTTCGAGCA GCTCCAACTCCGGACTTCAATTGCCGGTTGCTTTCTAGTCTCAGATAATCTTGATGGATCAAGGCAATTAAGAAGTGGTCTGATTGGAAACAATGAGGGT GGTTGGGCATCTGCCGTGAAGGAGAATCAGGTTTTGAAAGTCGGAATGGATAACATGAGGCTGAGGGTATCTGACCTTGAGAAGGAGTGCTCAAACATGA GACACGAGATCGAGAAATTGGACCGTGCAAAGGGATCAAGCAAGTGGGCAGCCGTCTCGAAGAAACTCGGGTTTAAGATAAAGTCTCAGATGTGCAGTGC TGAAGAAGGATCAGTTAGTAATCAGAAGAATAGTGGAAATAGTAAGATTGAGAAGTTGAAGGACAGACATATAGTAAAGCAGAAGAAAAATTCTTCTATT AGTGACAAAGAATCTGTTTCTTCAATTGTTTTTTCTTAGTGTTCTATAAGGTTACTATGTCATATCTTGAATAGTTTCTTTGTCTCTGCAATCTGCATCA CAAAGTTCCACTATGCTGTGTAATGTAAACTGTAGTTTTAACTTTTTCTTATTATGTCCAGATGTCTATGCATATAAAGTGTTCATGCCACTTCTACTTC AAAATACTCATTTGCTGCACCTTAGGTAATAACTAATCTCATTCGGGTGGTTGTTATTCCTAAAAAAATGAACTCTCGAT
• Tissue: pods
• Gene name: LI_gene_180297;
• Additional information: details;

Expression of Ll_transcript_516629

FPKM

• PAB: 0.5
• PNAB: 0
• PS1: 0.2
• PS2: 0.1
• PS3: 0
• PW1: 1
• PW2: 0.7
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516629

• Blastp: BTB/POZ domain-containing protein At1g30440 from Arabidopsis with 69.04% of identity
• Blastx: BTB/POZ domain-containing protein At5g03250 from Arabidopsis with 54.55% of identity
• Eggnog: BTB POZ domain-containing protein(ENOG410ZHWZ)
• Kegg: Link to kegg annotations (AT1G30440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415117.1)
• Pfam: NPH3 family (PF03000.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;