| Id Trinity | TRINITY_DN50830_c2_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_515128 |
| Sequence | GTCACCAATAACATACAACCACGTCTCTTTGTATTATTCACACCACTGACTTTCTGTATATAAAAAGATGTAACACCAACACAGTTTTCCACCCTGTCCA AACCTTAGTTTTCACCCTATCAAGTTGAAGTAGAAACCATGTCTCTGCTTTCAGATCTCATCAACCTCAACCTCTCTGAAACCTGCACAGATAAGATCAT TGCTGAATACATATGGTGAGCTTTTTGGAAATCTTATTCCATCAAGTATACCTTATTAAAAAACAGGGGACTCTATTTCCTTAAAAACAGAGTACTCTTG TTTATTTTTGGTTATGAAAACCATTGACCAAAGTCCTACTACAAAAAACTAACCTTTTTTGGATATATTTATGTTTCTGATTCTGGGTATATTTTGTTGT GATTCATTCTTATGGGACTTGTCTTCCTTAGACATGTTGTTGGATTAAATACATAAGAAGTAGAGACCTTTTTCATTTTTATTAGGCTGAGTTCTAAAAA TCTGTTCTTGGGTTTTATCTATTTTGTAAAATAGTATTTGAAAAGTGAAAACCACTTAATGTTTTTTTATGTATTGATAAATAGGATTGGTGGATCTGGT TTGGATATCAGAAGCAAAGCCAGGGTAAAGTTTTTTTCTTCATCACATGTGATAAATAGTTATGTAAACTTTTTCATGTTACTATTTCAACAGTTTTTGA TGATTTGTCTATATGATTTTGAAACAGACTCTTACTGGACCAGTAAATGACCCTTCAAAACTTCCCAAGTGGAACTATGATGGATCTAGCACAGGTCAAG CTCCTGGTGAAGACAGTGAAGTTATCCTATAGTATGAATCTCAACTATTTATTTATCCTTTTTCTACTTATTAATTGCCTTTTGTTTTCATCTTGTTTTG GCATAAAACTGATGTATGGAATTTCTTTTTTTGTCTGGTATATTTATTTTTAAAATAGCCCACAAGCTATTTTCAAGGACCCATTTAGAAGAGGCAACAA CATTCTTGTAAGTATTTTCAACATAAACAATTTTATCATAATTACTGAACCAATTATTTTTATATGCATCAAAAGTTACAATTTTTAAGCCCCCTATTAA GTTTTGATGTAAAACTATAGGTTATTTGTGATGCTTATACTCCAGCTGGTGAACCAATTCCAACAAATAAGAGGCATAATGCTGCCAAAATTTTCAATCA ACCTGAAGTTATTGCTGAGGAACCATGGTGTGTATTTCATAATATCCAAAATTGTATTTTTAATGTTTTAAACCATTATGCTTCACAAATTCTTGAAACC CTTTTTAGGAATCACTATTTACATTATGATCTATACATCAAGTTCTTATAAAATGATTAAAAAAATGGATCTTGATTTATATTAACAGGTATGGTATTGA GCAAGAGTATACCTTATTGCAGAAAGATACAAATTGGCCACTTGGTTGGCCAATTGGTGGATACCCTGGACCACAGGTATTAATATTTTTCATTTTCATA ATATCTTCTCGATCATGTCAATCATACACATTTATTTTCACATATACACATTTTCACAATTTGATTATCATTTCAATTATGTCACATAAAAGAACTGTGT ATGGAATTTGATTGTTATATAGTTCAGCAACCTAAACATATTTGATCTTTGAAGTTTCAACAACAACTTCAATTTGGCATCATTTTCTACAAATTAGTTC AATGGTCGATTGCCTAAGATTTCGGTCCAATTAATAAAATATCTTTGAACATGGTATACCATTCTGTAACTGTCAAAATATGATAAAGTTTTAATACATT AACCCATACATTAACTCATAAACATGAACCATGTGCATATGTTTCTTTGGGTTATAGGAAATATATCAATTATAGCAGGAGTGTAAATTGATTACTTTAA AACGTTGATGTGCAAATATCAAAATTTATTGTCATTAATTACAATATTTGTTTACCTTAATAATTAAATTACTGTATCATTGAACAGGGCCCATACTACT GTGGAATTGGTGCTGATAAAGCCTATGGCCGTGAGATTGTAGATGCACATTACAAAGCTTGTATTTATGCTGGCATCAACATTAGTGGTATCAATGGAGA AGTTATGCCTGGCCAGTGGGAATTCCAAGTTGGTCCTTCTGTTGGTATCTCTGCTGGAGATGAAATATGGGCTGCTCGTTACATACTAGCGAGGATTACT GAGATAGCTGGCGTGATTGTTTCATTTGATCCCAAGCCTATTCCGGGAGATTGGAATGGTGCAGGTGCTCATGCAAACTACAGCACCAAATCCATGAGAA AGGATGGAGGTTATGAGGTCATAAAGAAGGCCATTAAAAAGCTTGAATTGAAACACAAGGAACACATTGCTGCTTATGGAGAAGGCAATGAGAGGCGCCT CACTGGAAAACATGAAACAGCAGACATCAACAAATTCGTTTGGGTAAATTTAATAGTTGCATTGGCATCAACCTTTGTATTGGGAGCACAATGATTCAAT TTAAAGACCACATCACGTGATGTGGCCGCAATATTGTGGTTGCACTGACGGCATAACCACATCACATCGCAATTGCAATATGATATTGAATCACAATGAA GCTGTTGTATCGAACGGCAGTCCAACCACATCAGACTGTATTTGGGTTGTATCGGACGGCAACCCAACCACACCAGACTGCATTTGGCCGCAACTAACTC CATTTAAGCCTCATTGGACCATATCAAATAATATATTTTAATTACAAAATAACGAACTGTGACTGCAATTGCTATTGCAAACCACAATTTAAATTATTAG AAATATATGATGCTCTTGATGTTTTTATACTAGGAACTTCATAACCTAAAGTTTAATGTAATGTTTATTTTCTCCAAATAGGGTGTGGCAAACCGTGGTG CTTCAGTTAGAATTGGAAGAGACACAGAGAAAGAAGGCAAAGGTTACTTTGAGGACAGAAGGCCTGCTTCCAACATGGATCCTTATGTTGTCACCTCATT GATAGCAGAAACTACCATCCTTTGGAAACCATGAAGTTGAAGCAATTTGTGTCTTAGATTTAAACCATCATATATTTGTGTTTTCATCACATTTAGTACT AATTCATATAGTAAGGTGGTGTGTGTTTGGATTACAATAACTTTGTCATAAATAACAAGAAATGTTTCATTATTAATAATGGAATGTTTCGTTGCCAAAT TTCATTTCCCATGTGTTTTGTAATTTTGTTTGCTTAGGAAAAAATGTTGGACCACTGAAATGTCTATCACATTATCTCTTGCTTTATATTAAAGAATCCA CATATCCCTTGTCCTTGAGTTGTAGAATAATGTACAGTACTTTAGTTCACGTGTGCGTGAAATTGCAGAATAAATATAAAGTTTAATATTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_180316; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_515128
| Blastp | Glutamine synthetase nodule isozyme from Medicago with 90.27% of identity |
|---|---|
| Blastx | Glutamine synthetase cytosolic isozyme 1 from Soja with 90.85% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002361) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430470.1) |
| Pfam | Glutamine synthetase, catalytic domain (PF00120.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |