Ll_transcript_516678

• Id Trinity: TRINITY_DN50835_c0_g1_i2
• Name Transcript: Ll_transcript_516678
• Sequence: AACGACAAGATATTTAATTTCCTGTCCCCTGAGAAAAAAGAGAAAATAAACGGTTTAGATTTCTTCATCATCCATCAAAACCGTCCAACTCAATTCCACG GTCCAAATTCCTCTCATTACATTAAACATTATACGACATCACTTTCACAATGCATTTCCCATTTTACCCCTACACACTCTTCATTGCGTTGTAGAGAATG CTTTATTCATTGAGTTTCTCATCTTGTTAATGGAAGGACCTTAAACTTTCTCTCTCTCACTGCTTTCCTTTCTGCTTCGCTTTTTTCTTCTGTTTTTCAT TTTCCTCTTCAAAAATAAAAAAGCGATTCTCAAAACGATAACCGCTTTTTCTTCTGCGTGTCTGATCTATCAAACCTTGCTTCCTGAAGTGCGTTTTTCA GTTCTTCTTCTGCTACTACTTCCAACTCTTAATTGTTTCTATTTTAATTTTATTTTACTGTTCATCTTTTTCTCCATGCACTTTCAGCTAGAATTTGTTC CTTTTTGTTTTTATTTTGATTTTTTTAAAAGCAAGGTTTCAGTGTTGGTGTGGATCTATTGTGCTGCTGCAACGCTTTCTATTTTTATTATTTGGTGTTT GATTGCGCTGATAAACTGAGGGAGAGAAATACGGAAGAGAAGAGCGTTTTCTATTCTGATGTGTGAAGATAGTATAGTTCATAATTTAATATTATATTTC TGCAATCATTATTTATGTTTGCATTTATTTTAATTCTGCATTATTATCACGGCTTATTGAATGTTAGGGTTTCATAAAATTTTCGGGGAAAAGGAAACAG CTCTTTAAGTAAGATTTTGATTATAAAATGTTTAATATTCTAATACAATCACACTAAGATAACACATGCATGCAATATTTTATGATTCTTTGCTGTTTAA ATTGCTTACTGATTGATTGGTTATTCTTTTTGTTTCATGCTAATCTCTTGTTTGTGGTCATACTGGGAGGAGTTTTTTAATTATGGAATCTAGAGTTTCA TTTTTTATGCGTATTTGGTTGATTGTTATTAAGATAACTTTTCCGTTTCCGGCAATATGTTAAGTGCACTGTTTTTTTTACAGTTTGTGAGTGTGATGTC TCCGCCGCTGCTGGTTACGGATGAGGAAGGGCAGAGCAAAGTCTCGTCAATGGTAGCATCTGCATCTTCACAATCCTTGGACTGTTTCTCCCAGAATGGG GTTGAATTGAAGGAAAGAAATTACATGGGATTGTCTGATTGCTCATCAGTGGACAGTTCTAGCCCTACTGTCCCAAGCTTCTCTGATGAGAAAAAAGGGA ACCTGAATTTGAAGGCCACAGAGTTGAGTCTGGGTCTTCCTGGATCTCAATCTCCCGAATGGAACACAGATCTTTACTCATTAAGCTCGGCAAAACTTGA TGAAAAGCTACTGTTCCCTTTGCTTCCTATGAAAGATGAAATCTGCTTGGCGTCCCAGAAGACTGTGGTTTCAGGCAACAAAAGAGGCTTTGCTGATACC CTGGATGGGTTCCCTCAGGGAAAGTTTTCTGGCAATACAGGGATGGGTCTAATGCTGTCGCCTAGACCTTCTGGAGCTCAGCTAACCACAGTGAAAGAAG TTCAAAGCAATGTGTTACGAGAACGGCCTTGTGCAGCTAATGGTGCTTCTATTAGTGGCAGTGCTCCGGCTTCTAAGGCACAGGTTGTTGGCTGGCCTCC TATCAGATCATTTAGGAAAAACTCGATGGCAACCACTTCAAAGAACAATGATGAAGTTGATGGTAAACCATGTCCTGCCACTCTCTTTGTGAAGGTCAGC ATGGATGGTGCCCCTTATCTTAGGAAGGTAGATCTTAGTAATTATACAACATATCAGGAACTATCTTCCGCCCTTGAGAAGATGTTCAGCTGTTTTACCC TAGGCCAGTGTGGTTCCCATGGAACTCCAGGAAAAGAGATCTTGAGTGAGAGCAAGCTGAGGGACCTTCTGGATGGTTCAGAGTATGTGGTCACTTATGA AGATAAAGATGGAGATTGGATGCTTGTAGGGGATGTACCATGGGAGATGTTCACTGACACTTGCAGAAGGCTGAAAATCATGAAGGGTTCTGATGCCATT GGCTTAGCTCCCAGGGCCATGGAGAAGTCCAAAAGCAGGAGTTAGATGTTGTCCGGGGACTGATATGAAGTTGTACCTGGTTTTGGTGGTTAAATACAGT TCTGATGTTATCTATGTTTTTAAGTCCCCGATGAGTTTGTCTTGATCTGTTTACATTTGTTATTATTACTATAATATTTTATGAAGCTACCTTTAAATAT TAGTATTCGTGGAGTCTGTAACCATGCCACTGACCTGTTTGTTTGGATGAATTTAATGCCTAAATTGTCTATTATCGCCTACAAGGTTCATGCGTTTTAT TTTCACCCCAAATAAGAATATGGAGTTTAAGACTTCTATACCTTTGTCTCTTGTTTTTTTCCCTTTTAATCTTGAAGAGGATTATTTAATGCCCTCTTTT GAATCAAAATATGGTTTTAAGGTAGGACTAGGACCTCACTTGTAACATTGGAGATATGGTTAAGGTAGAACAGGTTGAGTAACTGAG
• Tissue: pods
• Gene name: LI_gene_180350;
• Additional information: details;

Expression of Ll_transcript_516678

FPKM

• PAB: 6.1
• PNAB: 10.9
• PS1: 6.3
• PS2: 2.3
• PS3: 3.9
• PW1: 6.4
• PW2: 5
• PW3: 7.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516678

• Blastp: Auxin-responsive protein IAA9 from Arabidopsis with 61.65% of identity
• Blastx: Auxin-responsive protein IAA9 from Arabidopsis with 62.35% of identity
• Eggnog: auxin-responsive protein(ENOG4111VTJ)
• Kegg: Link to kegg annotations (AT5G65670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445333.1)
• Pfam: AUX/IAA family (PF02309.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;