Ll_transcript_514680

• Id Trinity: TRINITY_DN50836_c1_g1_i2
• Name Transcript: Ll_transcript_514680
• Sequence: CTGTTTCTTGTGTTAATCAAACGCAATTCGCTCTTCAAATTCAAAACCCCTTCTTTATCCTCCATTGTGTTCTTTTTTTGTGAGGCATATATACAGAAAA GAGATGGATGAGTGTTAGTTTCATTTCCCACTGAATGGAAACAACACTCACTCACTTCCTCTATGGCCTCCTTCCATCATCACCAAATAACTCTCACATT CCCTCCTTTTCATTCTCAACACATAACAACACTACCAATGCACTAACCATAATTCCAAACGCAACCAAAACCAAAACCCAAACTCAAACAACACTAATCA ATGAACCAATTACCACACTTCATCACCAAAACACACACCCTTTGGGTTCAAACCATCTTGGAACAACCGTTTCCACGTGGCTACGTCATAGCATGAAGGC AATGGCATCAGATTTAGCTTCAGCCGAGTTACGAACCGAGTTTCAATTCTCCGAGTTGAGGCAAAGGATGAGACCGGGTTTGAGTTTCGTTATCGAAGCT CAACCTTATCTTAAAGCTGTTCCTTTGCCTCTTGGATTTGAAGTTCCTTGTTTGAAGGTTTGCACTCATTTTCCGACACTGTTTTGTTATTTTCGGAGAG AACTTCGTTGTGTTCTCAGTGAGTTGCAGAGTAAGGCGTTGCTTCGGGATTGGCGCCAAACTCACTCGTGGAAATTGGTTAAAGAGATTGCTAATTCAGA TCAGCATAGGGCAGTTGCAAGAAAGACAGTACAGCCGGAGATTGTCCAAGGGGTTTTAGGAATGGACTTGGAGAAGGTGAAGGCAATGCAGCAGAGGATT GATGAATTCACCAGCAGCATGTCTGAGCTGCTATGGATTGAAAGGGATTCTGAATTGGAGTACACTCAGGAGGAATTGGATGCAGTTCCTAAACCATATG GCACTTCTGAATCATCAAAGCCGATTGAGTTCTTGGTTAGCCATAGCCAGCCTCAGCAAGAACTCTGTGACACCATTTGCAATTTAACTGCCATCAGTAC CTCTAAAGGACTTGAGGGAATGCATTCAGTGTTATTCAAGGTTGAAGGGAACCATCGGCTACCGCCTACTACTCTTTCACCAGGAGACATGGTTTGTGTA CGAACCTGTGACAGAAAGGGTGCAGTTACAACTGCTTGCATGCAAGGATTTGTTGACAATCTTGGAGATGATGGCTGTACTATTAGTGTTGCTTTAGAGT CACTTCATGGCGATCCTACATTTTCTAAACTATTTGGGAAGAGTGTGCGCATTGACCGTTTTCAAGGACTGGCTGATGCTCTTACCTATGAGCGCAACTG TGAAGCCTTAATTCTGCTTCAGAAGAATGGTTTGTGCAAAAACAATCCTTCAATTTCTATTGTGGCTACACTATTTGGAGAGAGAGAAGATGTTGAATGG CTTGAGAAGAATCATGTGGTTGACTGGGAAGAAAAAAAATTGAATGGACTATTAGGAAATGAAACCATTGATGATTCTCAGCAGAGAACAATTGCTCTGG GTTTGAATAAGAAGAGGCCTGTGTTGGTTATCCAAGGACCTCCTGGTACTGGCAAGACTGGTATACTCAAGCATCTTATAGCGTGTGCTGTTCAGCAAGG AGAAAGGGTTCTTGTTACAGCACCTACTAATGCAGCTGTTGACAACATGGTTGAAAAGCTTTCAAATGTTGGATTAAATATTGTACGGGTTGGGAATCCA GCTCGTATATCAAAAACTGTGTCTTCAAAGTCTTTGGGAGATATTGTGAATGCTAAGCTTGCACCTTTTCGAGAAGAGTGTGAGAGGAAGAAGTCGGATC TAAGGAAAGATCTAAGTCATTGTTTAAAGGATGACTCACTAGCTGCGGGCATACGCCAACTTCTGAAACAGCTAAGAAGCTCGTTTAAGAAAAAGGAAAA GCAGACTATTAGTGAAGTTCTATCTAGTGCTCAGGTTGTGCTTGCTACTAATACTGGAGCAGCTGATCCTTTGATTCGAAAGCTAGATGCTTTTGACTTG GTTGTCATAGACGAAGCTGGACAGGCAATTGAACCCTCTTGCTGGATTCCTATATTGCAGGGAAAGCGTTGTATTCTTACTGGTGACCAATGCCAACTTG CTCCTGTCATATTATCTAGAAAGGCCTTAGAAGGTGGTTTAGGAATATCTTTACTGGAGAGAGCTACAACTTTGCATGAAGGGGTTCTCACCACCAGGTT AACAACACAATACCGTATGAATGATGCAATTGCTAGCTGGGCCTCAAAGGAGATGTATGGAGGATTGTTGAAATCTTCTGAGACTGTCTTTTCTCATCTT CTTGTAGACTCTCCTTTTGTTAAGCTTATGCCAGGTTGGTGCAATATTGATAGCTTAGTGATTGCTTTGATTAAGAGGCTGAGCATCGGTGCAATAGTAA GATTGTTTGCCTTGTGACTTAGAGATCGTGGGTTTAAATCCTGGACACAGTCTCTTCACTTGCAAAGCGTACATGGATAACACAATGCCCTCTACTATTG CTTGATACTAGAATGCCATATGGAATTCTGTCAGTTGGTTGTGAAGAGCGTCTAGACCCAGCTGGGACAGGCTCACTTTATAATGAAGGAGAAGCCGATA TAGTTCTGCAGCATGTATTTTCCTTAATATACTCTGGTGTTAACCCAACTGCCATTGTAGTACAATCCCCTTATGTTGCTCAAGTACAACTTTTGAGGGA TATGCTTGATGAAATCCCAGAGGCTGCAGGTACTGTGGTTGCAACTATTGATAGCTTTCAAGGTCAGGAAGCTGATGCAGTAATTTTATCCATGGTACGA TCGAACACATTAGGAGCTGTTGGGTTCCTTGGGGATAGCAGAAGAATCAATGTTGCCATCACAAGAGCACGCAAGCATGTAGCTGTGGTCTGTGACAGCT CAACCATATGCCAAAACACCTTCCTCGCAAGACTCGTGCGTCATATACGACACTTTGGTAGGGTGAAGCATGTCGAACCAGGTAGTTTTGGAGGGTCTGG ACTTGAGATGGGTCCACTATTACCTTCAATTGATTAGTGTAGCAACAGCAGTATGAATCAAATTTTAAACATGGGGTAGCAATTGCTTATATGATTGTCT TCCTTTCTTGTTTCTATTTTCTTATTGATTCACAAATAGGCTGGCCTTTCAAGTCATCAAAACTTTACAATACAAAGCAATTCATGAAATTCAACATTTG TATATGAAATACTACTCATGCATGGAAATTATGAAAGAAAAGTTTATTCAATCACCCAAACAAAAGTTGTATTTAGTAGCATCATTTAAATTGCAAATCC CAA
• Tissue: pods
• Gene name: LI_gene_180355;
• Additional information: details;

Expression of Ll_transcript_514680

FPKM

• PAB: 0.2
• PNAB: 1.5
• PS1: 0.6
• PS2: 0.3
• PS3: 0.8
• PW1: 0.5
• PW2: 0.8
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514680

• Blastp: DNA-binding protein SMUBP-2 from Homo with 33.4% of identity
• Blastx: DNA-binding protein SMUBP-2 from Homo with 33.4% of identity
• Eggnog: Helicase(COG1112)
• Kegg: Link to kegg annotations (3508)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449927.1)
• Pfam: AAA domain (PF13086.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;