Ll_transcript_514687

• Id Trinity: TRINITY_DN50836_c1_g1_i8
• Name Transcript: Ll_transcript_514687
• Sequence: CTGTTTCTTGTGTTAATCAAACGCAATTCGCTCTTCAAATTCAAAACCCCTTCTTTATCCTCCATTGTGTTCTTTTTTTGTGAGGCATATATACAGAAAA GAGATGGATGAGTGTTAGTTTCATTTCCCACTGAATGGAAACAACACTCACTCACTTCCTCTATGGCCTCCTTCCATCATCACCAAATAACTCTCACATT CCCTCCTTTTCATTCTCAACACATAACAACACTACCAATGCACTAACCATAATTCCAAACGCAACCAAAACCAAAACCCAAACTCAAACAACACTAATCA ATGAACCAATTACCACACTTCATCACCAAAACACACACCCTTTGGGTTCAAACCATCTTGGAACAACCGTTTCCACGTGGCTACGTCATAGCATGAAGGC AATGGCATCAGATTTAGCTTCAGCCGAGTTACGAACCGAGTTTCAATTCTCCGAGTTGAGGCAAAGGATGAGACCGGGTTTGAGTTTCGTTATCGAAGCT CAACCTTATCTTAAAGCTGTTCCTTTGCCTCTTGGATTTGAAGTTCCTTGTTTGAAGGTTTGCACTCATTTTCCGACACTGTTTTGTTATTTTCGGAGAG AACTTCGTTGTGTTCTCAGTGAGTTGCAGAGTAAGGCGTTGCTTCGGGATTGGCGCCAAACTCACTCGTGGAAATTGGTTAAAGAGATTGCTAATTCAGA TCAGCATAGGGCAGTTGCAAGAAAGACAGTACAGCCGGAGATTGTCCAAGGGGTTTTAGGAATGGACTTGGAGAAGGTGAAGGCAATGCAGCAGAGGATT GATGAATTCACCAGCAGCATGTCTGAGCTGCTATGGATTGAAAGGGATTCTGAATTGGAGTACACTCAGGAGGAATTGGATGCAGTTCCTAAACCATATG GCACTTCTGAATCATCAAAGCCGATTGAGTTCTTGGTTAGCCATAGCCAGCCTCAGCAAGAACTCTGTGACACCATTTGCAATTTAACTGCCATCAGTAC CTCTAAAGGACTTGAGGGAATGCATTCAGTGTTATTCAAGGTTGAAGGGAACCATCGGCTACCGCCTACTACTCTTTCACCAGGAGACATGGTTTGTGTA CGAACCTGTGACAGAAAGGGTGCAGTTACAACTGCTTGCATGCAAGGATTTGTTGACAATCTTGGAGATGATGGCTGTACTATTAGTGTTGCTTTAGAGT CACTTCATGGCGATCCTACATTTTCTAAACTATTTGGGAAGAGTGTGCGCATTGACCGTTTTCAAGGACTGGCTGATGCTCTTACCTATGAGCGCAACTG TGAAGCCTTAATTCTGCTTCAGAAGAATGGTTTGTGCAAAAACAATCCTTCAATTTCTATTGTGGCTACACTATTTGGAGAGAGAGAAGATGTTGAATGG CTTGAGAAGAATCATGTGGTTGACTGGGAAGAAAAAAAATTGAATGGACTATTAGGAAATGAAACCATTGATGATTCTCAGCAGAGAACAATTGCTCTGG GTTTGAATAAGAAGAGGCCTGTGTTGGTTATCCAAGGACCTCCTGGTACTGGCAAGACTGGTATACTCAAGCATCTTATAGCGTGTGCTGTTCAGCAAGG AGAAAGGGTTCTTGTTACAGCACCTACTAATGCAGCTGTTGACAACATGGTTGAAAAGCTTTCAAATGTTGGATTAAATATTGTACGGGTTGGGAATCCA GCTCGTATATCAAAAACTGTGTCTTCAAAGTCTTTGGGAGATATTGTGAATGCTAAGCTTGCACCTTTTCGAGAAGAGTGTGAGAGGAAGAAGTCGGATC TAAGGAAAGATCTAAGTCATTGTTTAAAGGATGACTCACTAGCTGCGGGCATACGCCAACTTCTGAAACAGCTAAGAAGCTCGTTTAAGAAAAAGGAAAA GCAGACTATTAGTGAAGTTCTATCTAGTGCTCAGGTTGTGCTTGCTACTAATACTGGAGCAGCTGATCCTTTGATTCGAAAGCTAGATGCTTTTGACTTG GTTGTCATAGACGAAGCTGGACAGGCAATTGAACCCTCTTGCTGGATTCCTATATTGCAGGGAAAGCGTTGTATTCTTACTGGTGACCAATGCCAACTTG CTCCTGTCATATTATCTAGAAAGGCCTTAGAAGGTGGTTTAGGAATATCTTTACTGGAGAGAGCTACAACTTTGCATGAAGGGGTTCTCACCACCAGGTT AACAACACAATACCGTATGAATGATGCAATTGCTAGCTGGGCCTCAAAGGAGATGTATGGAGGATTGTTGAAATCTTCTGAGACTGTCTTTTCTCATCTT CTTGTAGACTCTCCTTTTGTTAAGCGTACATGGATAACACAATGCCCTCTACTATTGCTTGATACTAGAATGCCATATGGAATTCTGTCAGTTGGTTGTG AAGAGCGTCTAGACCCAGCTGGGACAGGCTCACTTTATAATGAAGGAGAAGCCGATATAGTTCTGCAGCATGTATTTTCCTTAATATACTCTGGTGTTAA CCCAACTGCCATTGTAGTACAATCCCCTTATGTTGCTCAAGTACAACTTTTGAGGGATATGCTTGATGAAATCCCAGAGGCTGCAGGTACTGTGGTTGCA ACTATTGATAGCTTTCAAGGTCAGGAAGCTGATGCAGTAATTTTATCCATGGTACGATCGAACACATTAGGAGCTGTTGGGTTCCTTGGGGATAGCAGAA GAATCAATGTTGCCATCACAAGAGCACGCAAGCATGTAGCTGTGGTCTGTGACAGCTCAACCATATGCCAAAACACCTTCCTCGCAAGACTCGTGCGTCA TATACGACACTTTGGTAGGGTGAAGCATGTCGAACCAGGTAGTTTTGGAGGGTCTGGACTTGAGATGGGTCCACTATTACCTTCAATTGATTAGTGTAGC AACAGCAGTATGAATCAAATTTTAAACATGGGGTAGCAATTGCTTATATGATTGTCTTCCTTTCTTGTTTCTATTTTCTTATTGATTCACAAATAGGCTG GCCTTTCAAGTCATCAAAACTTTACAATACAAAGCAATTCATGAAATTCAACATTTGTATATGAAATACTACTCATGCATGGAAATTATGAAAGAAAAGT TTATTCAATCACCCAAACAAAAGTTGTATTTAGTAGCATCATTTAAATTGCAAATCCCAA
• Tissue: pods
• Gene name: LI_gene_180355;
• Additional information: details;

Expression of Ll_transcript_514687

FPKM

• PAB: 0.4
• PNAB: 2.5
• PS1: 1.7
• PS2: 1.9
• PS3: 1.6
• PW1: 0.8
• PW2: 1.1
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514687

• Blastp: DNA-binding protein SMUBP-2 from Mesocricetus with 35.26% of identity
• Blastx: DNA-binding protein SMUBP-2 from Mesocricetus with 35.26% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449927.1)
• Pfam: AAA domain (PF13086.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;