Ll_transcript_515606

• Id Trinity: TRINITY_DN50837_c1_g2_i2
• Name Transcript: Ll_transcript_515606
• Sequence: ATTAATTCAAACCATTGGATTTCTCTAAAATTGATGATTAGGATGAGGAGTAAGTATAAAAGACTTACTCTTGGAGTAACTTGATCCCTCCCCATAAAAA AATAGGGTGGTTTTTAAAGTTAGTTGTTTGTACTCCTGAACTTTAGTAGCATCAGTTCTTGCTTGTAGGGTTTTTAAAGTTACTTTCATTGGGAGGACTG GTCAGCCCTGTCTCCCCTCAGTCAATTTGTTGCTGTTGCTAGTAGGGTAGCTGCTGTGACCAGTGACACAGATGGCATGCCAAATTGACTGTTAACAGTG TGTGGTGTGTTGGGAAAGGATGTTGTGTGTGGCCATAACTATTGGTTGTTGCTTGCTTCTGAGTTCACTTTATAGTTCAACAGATTACTCTTTCTAAATG TGTGAGACTATCCTTGCAGTCTAATAAAAAAACAAGGAACAGGGCTTATGATATTCTCGTCCAAATTGGCCATGCATTTGGTGATGAGGAGAGAGGTGGA AACAAAGAAAACCTGTATCATTTTTTTAACATGGTTGCAGGAGGCTTGGCTGGGGATACTCCACATATGATAAGTTCAGCAGCCAAAGGTTTAGCTCGCT TGACATATGAATTCTCTGACCTTGTTTTAACTGCTCTTGATTGGCTACCATCCACATTTCTTCTCCTCCAGAGAAAAAATAAAGAGATAATTAAGGCTAA TCTTGCTTTATTGAAGGTATTAGTAGCCAAATCACAAGCCGAAGTTTTGCAGGTGCACCTGAGGAACATGGTGGAAGGTTTGTTAAACTGGCAAGATAAC ACCAAAAATCATTTCAAAGCAAAGGTGAAAAATATTTTGGAAATGCTAGTTGCGAAGTGTGGTCTGGAGGCTGTTAAAGCAGTCATGCCTGAAGATCATA TGAAGCTTCTTTCCAACATACGCAAGATCAAGGAGCGAAAAGAGCGGAATCGTAGTGTTAAATCTGAGGAAGCTAGATCTCATTTTTCAAAAGCAACTAC ATCCAGGCAAAGTACGTGGAATCATACAAAACTTTTTTCGGACTTCGATGAAGATAGTGACGGTAGTGATTCAGGGTACCTGAATGGCAAGACAGTTTCT AGAAGGGGCAAGTCTTCACATCTCAAATCAGCAGCGTCTTCATTTGGGCAAAAAAATATCAGACTAAAGAAGAATTTGCATGAGCACCTCTCTGACCAAT CAGATGACGAGCCACTTGATTTACTAGATAAGCAGAAAACAAGGTCAGCTCTTAGATCATCAGATTATCTTAAAAGAAAGTCAAGGCCAGATGATGAGTT CGAAATAGATTCAGAAGGACGCATGGTTATTAATGAGGAAGGGGAAAGAAAGATGGAAAAGCCTTCGGACCCTGATTTTGATATTAAGAGTGAGCGTGAT AGTCACATCTCTGCAAAGTCAGGAACCAAAACCCAAAAGCGGAGAAGAACATCGGAGTCTGGGTGGGCTTACACAGGGAAAGAATATTCTAGCAAAAAAG CAGGTGGAGATGTGAAGAGGAAGGACAAGCTTGAACCCTACGCATATTGGCCACTTGATCGGAAAATGATGAGTCGTCGACCTCAGCTTCGAGCTTCGGC TAGGAAAGGCATGGCAAGTGTTGTAAGGATGACAAAGAAGCTTGAAGGCAAGAGTGCATCTGGTGCACTGTCTATAAAGGGTTTGAAACCAAGGACTCAA AGGAAAGGTAGCAATAAAAATTAAATGAGTAATTTGATTGTTACATCATGTTTTGTAGCGTATACTATATAGTTTATGATGAGGTGTTGTTATACCAATT TTGAAGCTTCCTTTAATGTTCTGGTACAATAATGTATGTTATTTATGACATTTTTTATTCGTGTTGTTTTACAATTTGTTTTACAAAATATTCAAGTTCT ATTATAGTGCTTGATTTGTTTATGATTCCAATTGAAGCAATTAACACTTCGAATATTTGATCTGGCCGATGTTTATGATGAACTATGAATTCATTTCAC
• Tissue: pods
• Gene name: LI_gene_180359;
• Additional information: details;

Expression of Ll_transcript_515606

FPKM

• PAB: 1.2
• PNAB: 6.5
• PS1: 5
• PS2: 2.8
• PS3: 5.1
• PW1: 3
• PW2: 3.5
• PW3: 3.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_515606

• Blastp: Ribosomal RNA-processing protein 12 from Saccharomyces with 30.19% of identity
• Blastx: Ribosomal RNA-processing protein 12 from Saccharomyces with 28.5% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YPL012W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455321.1)
• Pfam: NUC173 domain (PF08161.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;