| Id Trinity | TRINITY_DN50838_c2_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_514910 |
| Sequence | GTAGCATTATCGCACACTTATTCCTAAGATATTCAAGTTTTCTCTTCATAAAAATTGCAAATACCCTTCGTTTAACCAAAAAGAGAAACGAACTATTCCT CTGATTTTCATCGATTTTTTTTTTACAATAATTTTAAACACTAGCCAAGTTATAGAAAAGAATGGCATTGAACATGACTCACCAGATCGGAAGCCTTGCC GGGACTCCAATATCATCAGATTCCACATCAGGAGACTCCGCTGTGACGGTTAGCGCGGCGGCGGTGTGGAAATCTCCGGCGGCGAATCTACGTTGCCAGG TAATGAAACCGGAGTTTGCTTCGGCGGAAGGTCTATCACCACCGTTGAGCCCGTGCAGGTCGCCGGTTCTAAACGGAATCCGGCCAGATCTGTCCGTAGC GTGTCAGGCGTTTGCGACGGAGGCACCGGCGGGTACGGAGGTGGAGCATAGAGAGGGAGGGAAGGTGAAGGCGAAGGGGAGCGGGGTTCCGGTGTACGTG ATGATGCCGCTGGATAGCGTGACGGTAGGGAATACGGTGAATCGGAAGAAGGCGATTAACGTGGCGATGGCGGCGCTGAAGAGCGCCGGAGTGGAAGGTG TGATGATGGATGTGTGGTGGGGATTGGTGGAGAGAGAGGCTCCGGGAGAGTATAATTGGGACGGTTATGTGGAACTGATGGAGATGGCGAAGAAGCATGG CTTGAAGGTGCAGGCGGTGATGTCGTTTCATCAATGTGGCGGTAACGTCGGTGATTCTTGCACTATCCCCTTGCCTAAATGGGTAGGTGAAGAGATTGAC AATGATCCTGATCTTGCATACACTGATCAATGGGGAAGAAGAAACTATGAATATGTATCACTTGGCTGTGATACCTTGCCCGTACTCAAGGGCCGAACAC CAGTTCAATGTTATGCTGATTTCATGCGTTCTTTCAGAGACAATTTCAAGCACCTTCTCGGTGACACCATTGTGGTAAACATCTATAACTATGAACATGA TTTATGATAAAGTATTATAATATCGTTCAATTACGCTGGTATCAAGATCTAGTTTTTGTATTTACCTTCTTACCTGAACTTCTATTACTGGCTTAATTCA GGAAATCCAAGTTGGCATGGGACCAGCTGGTGAGCTCCGTTACCCTTCATACCCAGAGCAAAATGGCACATGGAAATTCCCAGGAATTGGTGCTTTCCAA TGCTATGACAAGGTTCAACTTTTTCTCTGTTTTGTACTCATTTGAGTCATTTCTTATATTAATTGTTGGACTAATGATATTTTCACACTCTAAACTTACT TCGTAATCATTGATCATCTAACCACCATTGTTTTTTCCAAAACAAAAAGATCTCTGATCAATGGTTATAATTTGTTAAGTGATATGGGTAGATCATTTTC CTACTTGTTTAATAGTGTTATTTGGCTTGTATTTTATATTTCCTTCATTTTTCTTTGGTGCAGTATATGTTGAGTAGCTTAAAAGCTTCTGCAGAAGCTC AAGGTAAGCATGACTGGGGAAGCACAGGCCCCACTGATGCTGGCGAGTATAACAACTGGCCAGAAGACACAACATTTTTCCGCAAAGAAGGTGGAGGATG GGATAGTGAATATGGAGAATTTTTCCTTACCTGGTACTCTCAGATGCTCTTAGACCATGGTGAAAGGATTCTCACATCAGCTAAGTCAATCTTTAACGAC ATCGGAGTTAAAATATCAGTGAAGGTTGCTGGAATCCACTGGCACTATGGTACAAGGTCTCATGCACCAGAACTCACAGCCGGATATTACAACACCCGGT TCCGCGATGGCTACCTCCCAATTGCTCAAATGCTGGCTCGCCATGGTGCCATCTTCAACTTCACATGCATCGAGATGCGAGATCACGAGCAGCCACAAGA TGCTCTATGTGCACCGGAGAAGCTCGTGAAGCAAGTGGCCTTAGCAACCCAGAAAGCACAGGTCCCTCTTGCGGGCGAAAATGCATTGCCGCGGTATGAT GAATATGCACATGAGCAAATAATAAAGGCATCACAGTTGGATGTTGATGGTAACTCAGATGACACAGAAATGTGTGCATTCACATACCTGAGGATGAACC CACAGTTGTTTCAACCAGATAATTGGAGGAAGTTTGTGGCATTTGTGAAGAAGATCAAAGAAGGGAAAGGTGCCCATAAGTGTTGGGAACAAGTTGAGAG GGAAGCAGAGCATTTTGTGCATGTTACACAACCTCTTGTGCAAGAAGCTGCAGTGCTTATGCACTAAGAATTGTTCGAATTCTATTATGTCAATTCAGGA GAAAAAGTCACAAGTAGGCCATGAAAGTTTTAGGGAACTAGTAGCCTAATTTTGTGGCTGTTACGATGCATTATAAATTTGTATTACTATTGCTGGATTC TACAACATCATGTTATATGTTTCCTATATTTCACTTGTACAAAATAGTCTCGTATTTTTACATCATTAAACTGGTACAGTACAAAAAAAATGTTACTTTA ATCTACTGCATAGCGTAATGGGCTACATGATACGTGTTTTCATATTTATAGTCACCGTTTATTGTTTTCATTTCATTAATGTGGAATTCATCTACACACG AGTCATCAAGTTCCACTCATCTGTATAAGACTTGTATTATCTTGTCGCAAAACTATTTGGAGTACCACTCTTTTATTATATGGAGATTTCTAGTGTTAGT TGTTATGTGTTAGTTATGTTAGTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_180371; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_514910
| Blastp | Beta-amylase 1, chloroplastic from Arabidopsis with 82.71% of identity |
|---|---|
| Blastx | Beta-amylase 1, chloroplastic from Arabidopsis with 82.16% of identity |
| Eggnog | beta-amylase(ENOG410XRH5) |
| Kegg | Link to kegg annotations (AT3G23920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431385.1) |
| Pfam | Glycosyl hydrolase family 14 (PF01373.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |