Ll_transcript_514914

• Id Trinity: TRINITY_DN50838_c2_g4_i5
• Name Transcript: Ll_transcript_514914
• Sequence: GTAGCATTATCGCACACTTATTCCTAAGATATTCAAGTTTTCTCTTCATAAAAATTGCAAATACCCTTCGTTTAACCAAAAAGAGAAACGAACTATTCCT CTGATTTTCATCGATTTTTTTTTTACAATAATTTTAAACACTAGCCAAGTTATAGAAAAGAATGGCATTGAACATGACTCACCAGATCGGAAGCCTTGCC GGGACTCCAATATCATCAGATTCCACATCAGGAGACTCCGCTGTGACGGTTAGCGCGGCGGCGGTGTGGAAATCTCCGGCGGCGAATCTACGTTGCCAGG TAATGAAACCGGAGTTTGCTTCGGCGGAAGGTCTATCACCACCGTTGAGCCCGTGCAGGTCGCCGGTTCTAAACGGAATCCGGCCAGATCTGTCCGTAGC GTGTCAGGCGTTTGCGACGGAGGCACCGGCGGGTACGGAGGTGGAGCATAGAGAGGGAGGGAAGGTGAAGGCGAAGGGGAGCGGGGTTCCGGTGTACGTG ATGATGCCGCTGGATAGCGTGACGGTAGGGAATACGGTGAATCGGAAGAAGGCGATTAACGTGGCGATGGCGGCGCTGAAGAGCGCCGGAGTGGAAGGTG TGATGATGGATGTGTGGTGGGGATTGGTGGAGAGAGAGGCTCCGGGAGAGTATAATTGGGACGGTTATGTGGAACTGATGGAGATGGCGAAGAAGCATGG CTTGAAGGTGCAGGCGGTGATGTCGTTTCATCAATGTGGCGGTAACGTCGGTGATTCTTGCACGTGAGTGTTACTCCAATCTATACTCTTGTTTACGATT TTTTATATTCTTAAATTATTGTTTAGGATTTATTATTTATTTTTATTTACTGTTCAGCATAAAGTGATTTTGAATTTTATTATTAGTATCAAACATATTT TCTCATAAAGAACTAATCCATTAGTTTCTGACTATCTTTTCCTGTAAGTGTTGTTATTAGGAATCTTTGCAATCCAATTAATCATTACACTACTAGCAAG TTGTTGTAGTGATTTTGAAATTTGAAGTAAATTAGCATGGTTTGAATTTATTCAGACAAAGCAATCTTATGCATAAAATTTCTGTCACGCCTTCAAGCAA AAGATGCAAGGATTCGAATAAGTGTTTTTCAATGAAGTTTTTGATAAATGAAATTTTCAATTTGGTTGCTAAAAGTTTTAGACAAGGGTTAAATTTTAGA TATATTATTATTTCATATCCGAAATTATTTTGATCACTATTTTATATTTGTATGAATAATATTAAATTTTTTATTTCTCATAAACTTGGTTAGCTATGTG CCTATGTACCAAAAAAAAAAATCAGATCAGTAGCTTTTTCCTTATGATCAATGAATCTGGGTACGATTGGGTTCCAGCTTGTTAAACACCCCTTCAACGA TTCAATATGAGCTTCTCAAACGATGGTTGAAGTAGGATTTATATATTATTAATATAAGATTTATATATAATCAATATATTATTTATCAGTTATTTTATAT TAGTTATATTATGAATGATGATATAATAATATAAAAAACTCTTATATTGTTGTATATATTATTCTTTAATTTATGATACTTAATTGAAATAAGGATAAAA AATTACTTATAAAAAGATTATCAAGCTTTCTCTTCTATATTAGTACTAAATATTTTTATGAGATTACAGATTTATATTGTCCTTTTATATAAATTTTTAT AAATAAAAAATGAATCGAAATTTAAATAAAAGAAAATTGAAAACTTGGGTATTTCAATGAACTATTTTTATTATAAATATTCAAATAATTAAGTTTAGCA AAAATGGTACCACATAAAGATGACGTGACGTGTGGTGTAAATCAAATTAATGAGAAAAGTACCAAATCATGTAAGAGAATTTTAGGAGCATTTCTATTAT TGATGTTGATGTAATTTCTTATGAAACCAACGCATCATTCAATTTACTCAATTGATAATTATAAAAAAGAAGTTTAAGTTATATTAATTTATAATTATTA AAAGAGGCGTTTGGCATATCGAGTTTTACTTTATTTGAGGCTTCTTGTTAAAATTTCATAAAATAGTATGGGACAATAGTGACAAAAGATGGTGGTTTCG TGATGGAGCGGTGAAACCAAGTAAGAGGACTTTATGATTGAAGTCGGTATCGCTATAGAAATAAGTTTAGTAGCTTTTATCTATGTTTAGATAGTGGACC CAATAACTAAATTTGTTATTTGTTTATGCGATATTCTAAGTCCTTGAAAAACAAAAAATATTAATATGTAATGATATGTTTACATTTTAAATATAATAAA ATAGCATTTTTATTATTTAAAATGCAAAGAAATTAAAGTATTGGTCTTCAACAGAAAGAGGATTCCTATTCATTTTTCTAGAGGTAAGATGAATTTTGAT TTCGAATTAGAATATTTTTTAGAAATAACATAATATGTATGAAAGACCTTAGAATTTTTAATGAAAATATGCTAGATAATTATGTTTGTGTTGGACTCAA GTTATATATGCTAGTGTAAAAAATCTTTACATTTCTATATCCAAATAATTTTCTATTTTTTTATATTTTTATATAGAGACACGGAAGGGAGAGAAATAAT TGTGATAAGATTAATTTGTAGATGTCTATGACTTTTTATTCAATGGATTATATTATGAGAATATTCGTTATATGACTTTTGTTTGATTTTTTAGTATTAT ATTATTTCTATAGATCTTTGCACAAATAGCAGTATAGCACAATGTTTGAATAACAAATAATCGATTGATTTATTGATTTCGTCTTGTGTGCAGTATCCCC TTGCCTAAATGGGTAGGTGAAGAGATTGACAATGATCCTGATCTTGCATACACTGATCAATGGGGAAGAAGAAA
• Tissue: pods
• Gene name: LI_gene_180371;
• Additional information: details;

Expression of Ll_transcript_514914

FPKM

• PAB: 1.6
• PNAB: 0.3
• PS1: 0.1
• PS2: 0.2
• PS3: 0.4
• PW1: 0.1
• PW2: 0.1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514914

• Blastp: Beta-amylase 1, chloroplastic from Arabidopsis with 57.49% of identity
• Blastx: Beta-amylase 1, chloroplastic from Arabidopsis with 56.28% of identity
• Eggnog: beta-amylase(ENOG410XRH5)
• Kegg: Link to kegg annotations (AT3G23920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431385.1)
• Pfam: Glycosyl hydrolase family 14 (PF01373.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;