| Id Trinity | TRINITY_DN50839_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_514719 |
| Sequence | CAAAAAGATACAACCCATACCAGATACTGATACATTACACCTTCTTTTCCCTTCAATTATTATTATAAACGATTAAAGAAAAAACACTCACTTTCCATTC CTTCTTTGCAGATCAGAAAAGAAAGAAGCGTGTGGCACTGCAATGGCGAGAAAAGCGGTTTTAATCGGATGCAACTATCCAGGAACAAAGGCAGAATTGA GAGGATGCATAAACGACGTTTGGAAAATGCACAGCTCTCTCATCAACAGATTCGGTTTTTCTGAAGACGACATCGTCGTTTTGATCGACACCGACGACTC TTACACTCAGCCTACCGGGAAGAACATCCGTTCTGCGTTGCAAAGGCTGATCCGATCATCGGAGGAAGGTGACGTGCTTTTCGTGCATTACAGCGGACAC GGCACGCGCCTCCCTGCGGAAACCGGCGAGGATGATGATACTGGTTATGATGAATGCATTGTTCCTTCTGATATGAATCTCATCACTGATGATGATTTCA AGGAATTTGTAGATGGGATCCCTAGAGGTGTTAGGCTTACAATTGTATCAGATTCTTGTCATAGTGGTGGTTTAATTGAAGAAGCTAAGGAACAGATCGG AGAGAGTACAAAGGGAGAAGACCAAGATTCTGGCTCTGGTTCTGGCTTTGGATTGTCAAACTTTCTGCATCGAAAAGTGGAGGATGCTTTCGAGTCTCGT GGTATTCATGTCCCTTCAGCATTGCGGCACCATGGACATGGGAATGATGGAGATGAAGATGGGGATGCTGAACTCCCACATGGGCGATACGGCTATGTAA AGAACAAATCTCTGCCACTTTCAACCCTGATTGATATTCTCAAGCAGAAAACTGGGAAAGATGATATAGATGTTGGGAAACTGAGGCCTACGCTTTTTGA TGTTTTTGGGGATGATGCTAGCCCTAAGGTAAAGAAGTTCATGAAGGTGATCCTGGACAAACTCCAACATGGAGATGGTGAAAGTGGAGAACAGGGTGGA ATCTTGGGGTTTGTGGGTAGTCTTGCCCAAGAGTTTCTGAAGCAAAAGCTGGATGAGAATGATGAGGGATATGCAAAACCTGCTTTAGAGACACATGTGG AGAGTAAGCATGAGGCGTATGCTGGATCAAACAAACGTGGCCTCCCAGAAGGTGGAATTCTGCTGAGTGGTTGTCAAACTGATCAGACTTCAGCAGATGC AAGCCCTGCAGGAAATGCTGCCAGTGCTTATGGTGCTTTCAGCAATGCAATTCAGACTATACTTGAGGAATCTGATGGTGCAATCACGAATCATGAGCTT GTTCTGAAGGCTCGAGAGAAGCTGAAGAGGGCGGGTTTTACTCAGCAACCTGGACTCTATTGTAGTGACCATTATGTTGACGCTCCTTTCGTGGCTTGAT GTCTCTTCTTATGCAGACAAGGTGAATCATGTGTCTTGTTTTCTTGTATGCTTATGTATCACTGTGTGTTTGAGGTGTGTGTTGTGAGAAATGATGTGGA ACAACAAGAAATGTTTACTTCAAATATAATTTTTCAATAATCATTTATGATATGTTCAGACTGGACTACATGTAATACAACCTAGCCATCTACTATGTTA CACTTTAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_180374; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_514719
| Blastp | Metacaspase-5 from Arabidopsis with 64.68% of identity |
|---|---|
| Blastx | Metacaspase-4 from Arabidopsis with 62.74% of identity |
| Eggnog | Metacaspase(ENOG410Y41C) |
| Kegg | Link to kegg annotations (AT1G79330) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449305.1) |
| Pfam | Caspase domain (PF00656.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |