Ll_transcript_514750

• Id Trinity: TRINITY_DN50839_c0_g2_i3
• Name Transcript: Ll_transcript_514750
• Sequence: CAAAAAGATACAACCCATACCAGATACTGATACATTACACCTTCTTTTCCCTTCAATTATTATTATAAACGATTAAAGAAAAAACACTCACTTTCCATTC CTTCTTTGCAGATCAGAAAAGAAAGAAGCGTGTGGCACTGCAATGGCGAGAAAAGCGGTTTTAATCGGATGCAACTATCCAGGAACAAAGGCAGAATTGA GAGGATGCATAAACGACGTTTGGAAAATGCACAGCTCTCTCATCAACAGATTCGGTTTTTCTGAAGACGACATCGTCGTTTTGATCGACACCGACGACTC TTACACTCAGCCTACCGGGAAGAACATCCGTTCTGCGTTGCAAAGGCTGATCCGATCATCGGAGGAAGGTGACGTGCTTTTCGTGCATTACAGCGGACAC GGCACGCGCCTCCCTGCGGAAACCGGCGAGGATGATGATACTGGTTATGATGAATGCATTGTTCCTTCTGATATGAATCTCATCACTGGTTTGTTCAATT CCAGAATCAACCTATTTTAGTAGCATATTTTATTTTTATCTTAATTGCAATATTTGTTGACTTTGTTTGATCTGTATTGTTTTATGATTATGATTCAAAC CAATTGCTTATTTATTGGATAAAGTTCAAATCGTTTTCTGCACATATCTACCATGGCATGATTTTGTCTTTTAATTTTTAGATTTGCGATATAGATTATT TTAGAGTGTAATATCTATGAATGCATTGTTCCTTCTGATATGAATCTCATCACTGGTTTGTTCAATTTCAGATTCAACACATTTTATTTTTTATGTTAAT TGTAATGTTAATTGACTTTGTTTGATCTGTAATATTTTATGAATATGATTGAAACTAATTGCTTATTTATTGGATAAAGTTTTCTGCACATATCTACCAT GGCATGATTTTGTCTTTTAGAGTGTAGTATCTATGCGGCATAAAGATTTATATATAGTCACTATTCATTTGGATTTCTTTTGAAAAGTCAATGATAATTA CATATAAATGATGATTGATATAATAACAATATAGTCAGTGCATACATTTTTTCTCTCGTTATTTTATTATACGATTTTGGTAAAGAGCTATTGAAGATGA TTCTTGTGGAAAGTGATGAGGCATTTATTTTTGTGCAAACAGATGATGATTTCAAGGAATTTGTAGATGGGATCCCTAGAGGTGTTAGGCTTACAATTGT ATCAGATTCTTGTCATAGTGGTGGTTTAATTGAAGAAGCTAAGGAACAGATCGGAGAGAGTACAAAGGGAGAAGACCAAGATTCTGGCTCTGGTTCTGGC TTTGGATTGTCAAACTTTCTGCATCGAAAAGTGGAGGATGCTTTCGAGTCTCGTGGTATTCATGTCCCTTCAGCATTGCGGCACCATGGACATGGGAATG ATGGAGATGAAGATGGGGATGCTGAACTCCCACATGGGCGATACGGCTATGTAAAGAACAAATCTCTGCCACTTTCAACCCTGATTGATATTCTCAAGCA GAAAACTGGGAAAGATGATATAGATGTTGGGAAACTGAGGCCTACGCTTTTTGATGTTTTTGGGGATGATGCTAGCCCTAAGGTAAAGAAGTTCATGAAG GTGATCCTGGACAAACTCCAACATGGAGATGGTGAAAGTGGAGAACAGGGTGGAATCTTGGGGTTTGTGGGTAGTCTTGCCCAAGAGTTTCTGAAGCAAA AGCTGGATGAGAATGATGAGGGATATGCAAAACCTGCTTTAGAGACACATGTGGAGAGTAAGCATGAGGCGTATGCTGGATCAAACAAACGTGGCCTCCC AGAAGGTGGAATTCTGCTGAGTGGTTGTCAAACTGATCAGACTTCAGCAGATGCAAGCCCTGCAGGAAATGCTGCCAGTGCTTATGGTGCTTTCAGCAAT GCAATTCAGACTATACTTGAGGAATCTGATGGTGCAATCACGAATCATGAGCTTGTTCTGAAGGCTCGAGAGAAGCTGAAGAGGGCGGGTTTTACTCAGC AACCTGGACTCTATTGTAGTGACCATTATGTTGACGCTCCTTTCGTGGCTTGATGTCTCTTCTTATGCAGACAAGGTGAATCATGTGTCTTGTTTTCTTG TATGCTTATGTATCACTGTGTGTTTGAGGTGTGTGTTGTGAGAAATGATGTGGAACAACAAGAAATGTTTACTTCAAATATAATTTTTCAATAATCATTT ATGATATGTTCAGACTGGACTACATGTAATACAACCTAGCCATCTACTATGTTACACTTTAAAAAA
• Tissue: pods
• Gene name: LI_gene_180374;
• Additional information: details;

Expression of Ll_transcript_514750

FPKM

• PAB: 1.3
• PNAB: 0.6
• PS1: 0.5
• PS2: 0.5
• PS3: 0.8
• PW1: 0.5
• PW2: 0.7
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514750

• Blastp: Metacaspase-5 from Arabidopsis with 60% of identity
• Blastx: Metacaspase-4 from Arabidopsis with 58.06% of identity
• Eggnog: Metacaspase(ENOG410Y41C)
• Kegg: Link to kegg annotations (AT1G79330)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449305.1)
• Pfam: Caspase domain (PF00656.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;