Ll_transcript_515371

• Id Trinity: TRINITY_DN50840_c1_g1_i1
• Name Transcript: Ll_transcript_515371
• Sequence: TCCTGTTGTAAGTCTTCCACTATTTGTTTCAAAAGTGGATATGATTCTTTCTCTAGTTGCAGCTGCTGTTGGTGCATCCATATAGGAAATGAAATAATTC CCCTTAATTCTCCTTCCTCAAACACTCGTGACAAAGAATTCGTAGCTTTGTTTTTTGGACCCGACTTATAAATAACTTCAAAATGATATCCCAACAACTT TGCAATCCAATTCTGCTGGTCAGCCTTGGTTATTTGCTGCTGTAAAATATGCCCCAAACTCTTTTGATCTGAGTACACCTTGAAACTCCTCCCTAGTAAA TAAGGCCTCCAATGTTGCACCGCTAACACAAGAGCCATTAGTTCCTTTTCATACGCTGATTTGCTTAAATTGTTTGGTGATAAAGCCTTACTAAAATAAG CTATTGGTTGCATGTTTTGTATCAAGACAGCACCTATACCTTTCCCGGAAGCATCACATTCAATATCAAATGGTTGGGGAAAAATTAGGAAGAGTCAACA CAGGAGCTTGAGTCATCATCTTTAATTCTTCGAAAGCTTCTAATGCTGTAGGATTCCAATTAAATCCTTCCTTCGTTAATTCTGTGAGAGGTTTAACAAT CTTTCCATATCCTGCAATGAATTTTCTGTAATACCCGGTCAGCCCTAGAAACGCCCTTACTCCTCTCACATTGCGAGGAATTGGCCATTCTATCACACTT CTAATTTTTTCGGGATCCACCGCCGCACCTTGATAAAAAATTAAATGACCCAAATACTCCACTTCCCGATTGCCAAACACACATTTCTTTCTATTTGCCA CAAACTGTTGATTTTGTAATACTTCCATGACTGTAGTTAAGTGCTCCACATGCTCCTGCCACCCTTTACTGTACACCAATATGTCATCGAAGAAAACTAG AACAAACTTCCTCAAATAAGGCTTGAATAGTGGATTGAAAGGTTGCAGGGGCATTGGTTAGCCCAAATGGCATAACCAAGTATTCATAGTGGTCTTTATG TGTTCGAAATGCTGTTTTATGCACATCCTCCTCCCTCATACGAATTTGGTGATATCCTGACTTCAAATTCAGTTTAGAAAAATAAGCAGCACCATGTAAC TCATCCAGCAGCTCCTCTACTACTGGAATGGGATACTTATCATGAATTGTTACCTTATTCAACTGTCTATAATCCACACACATCCTCCAAGTAGCATCCT TCTTCCGAACCAATATGACAGGGCTGGAAAAAGCACTAGAACTGTGTCGGATAAGCCCCTGTTGTAGCATTTCGCTCACTTGTTTTTCAATTTCTTCTTT ATGGTGATAAGGATATCGATAAGGTCTCACACTAACCGGTCCCGTCTGTTTGTGCAGCTCAATGGTGTGTGTCACACTCCTTGCCGGTGGCAGGCCTTGG GGTTCTCTAAACACTGAAGAAAATTTTGTGAGGACTTGTTGGAGTTCCCTGTCTTGTTCATTTGAAAGCCTTCTTTCCTCCCTTAAACCATTACCTTCAG TACTTTCTTTCATTAAACTTTGCAGTGATGCTACCGGTTTCTTAGGATATTTGTACTGGCCAGTTTTCTGTCCTTGTAGTACCACCCTTTCTCCCTTCCA ATAGAAACTGATAGTCATTTCCTCCCAATCAAATGTGACTTTTCCAAACCTCTGCAACCAAACCACTCCCAAGATCATGTCTAGGTTCCCAAGTTCCAAC ACATAAGACTCTGCTGAAGTTGGGAACTCTCCCAATTTAATATCCATCCTCTTGCACTTACCTCTTGTAGATACTTTGTGCCCATCTCCTAATCTCACCC CCATCGTCTTCCCCTGTGCTACTGCAATCTCCAAAGCTGCCACTACTTGAGGAGAAATGAAGTTATGGCTAGCACCAGTGTCAATCAATACCAAGACCGA AACGCCGTTAAATTTCCCTCCACACGTACAGTTGAAGGAGAAACTCCCCATCTCTTTGTGTCCACAACACCGAAAACACCCATAGACCCACATTCCAGGT TCGATTCTGTCTCATCTTCCTCTCTGACCTAAATAGCCACAATCTCCCCCTCTTCGTTTAATGATTCATCGTCTCCCAACACCACTAAACCTAATTGCTT CTCCGTGCATTGATGAAGAGGATGATACTTTCCTCCACACTTAAAACATAATCCTTGAGCCTTTCTATTCATTAGCTCTGAGTATGGAAGGTGTTTGGTA CCTCGATTTCGGTCATTGGTGAAGAATCGCCTTCCTTCTTGGTTGTTTGTTCGTGTTCCTTGAGGAGGTACTGCACATGAATCATTTTGGAAGGGAAACA CTTTGTGTTGTGTTTGATTACCCTTTATGGGCCCAAGCCCATTACCCATTTTACCCATATTTGGGTTTTGACCCGCTCCGGGTCCTACTTCTCCATAACC CATCCTCCAGTCTTTATTCCCTTTCCACCCAGGCACTCCACTGTTACGAGAATTTGACACCCCAAGCAACTCAACCTCTACATCTCGTGCAACTCTCATG GCTTGAAGGCGGTTCACCGAATTGAGGGTTCAAACTCAAATTCGGGTAAATGGTCAACCTGTGAAGATATGAATTCAAATTCGGACACATATTCCTCCAC ACTTCCCGTATGAACGAGATCTTTGAGTTCCTTAAAAGGATTATCACTCTGGCGACCCCCGTAGCGATCGATTAGGGCTCTCTTCATCCTCGCCCAGGTA AGATCCTTCTCTGTAGCTCGTAAAAGATTAAACCAATGAATAGTGGTACCTTCCATACCCAACTTGGCCAGCCGCACCTTTATCTCCTCCGACGGTCCTT GTACTTCAAAGTAAGTCTCTACTCTCGTGATCCATCCTACTGGGTCTGTTCCATCGAACGAGGGCAACTCCACCCTTTTAACTGCCATTTGATATTCATT CACTGTATCTTCTCTTCAGAATGTGTCGGTGGTCTCCTCAGATGGATTTCTTAACCTAGCAAATTCCTCTAGGATGGATTGACGAAATTCCACCAGAGAT TGTCACACTGTCATCTCCATGTTTGCCATTCTCTCTTCCAAAGCATTCATTTTGTTTGTCATCTTCGGTGGCATGGACAACCGTACATGACTCTAGCTCC GATTTCGTATCCGGTAGGTCGGACCAATGATAGGAATTAGTAGAAAAACAGTAATGCAGTAGTGTATATTTATTTATGCAAACAGTAGTGAGCTAAAGCT CTACAAAAGTGTGTAAGAAAATAACCAGAAAATATCCAGATCTAGGACTCCTCTAGAGAATTCTCTCTCTCTAGCTTTTCTACAATATTCTCCATATCCC CGTATCTGATATTTTACCCCTTAATATAACAAAATTCCCTTCCCATACAGGATTCCAGCCACCTCACTCTTCTAACTAACTTTTCTTTTCTCTCTCCCCC GGTCCACCTTGTTTCTCCTAGTGTATACTTGCCGCCAAACTTTGGGCCTTGCTGTCACAATTGTTTCCTCTTGGTTAATAATAGGCCCACCACTTTCTGT TGCTCTATCACATTGTGTGTCTTACAGTTGTGCCGTAATATTCTCCCTTATGTTTGAGTGACACCTTTCTACCACATATGACACCTGAAAGAGTCCACTA TTTCATCCACCTCACATTAATCCTATAGTTTACATCTCCCTCAATTTTCCCATCTTGTTGTATAATTGATCAAATATACTTAAATCTAGTGATTTGTAGT ATGACATGATCTCCAATTTTTACATCTATAGTGGGGTTTGTTTGCTTCTTGGTTATCTTATAACTGCCAAGAACTAAATTGCAACTTCAAAAGGGATTTT GTTTTTCATTTGTTCATGCCTGCCTTCTTAATTGTTCACCCCATTTTCTTTTCTTAGATGATTCATTTTTAACTTGATTGTGATTATGACCTTTTTTCCC TTTTTTGGCTGTAAATATTTGTTTTGCTTGTTTTAGGTGCAATTGATAGACAATTTCACCAACAAGAAAGGATTGACCAGTCATTGCTATAGGATTGCAT ATAGATCTATGGAACGTTCTCTTACTGATGAAGAAATTAACGATCTGCAGTGGAAAGTAAGAGAACAGGTGCAGAGCAAACTGAATGTTGTCATAAGATG AGCTTAACATTATACACATTTGCTGTCTCTGTTCATATTTTTACCTCCACAGCAACCGAATCACTCCATAGACAAATGTATTACTGAGTTCTTTTCAACA TCAACATGGGTTGGTTCAAATCTTGCTTGTTAAATTATGCACATCTGTTAGATTTTTTAACCCATTTGGTTATTTTTTTATTCTCATCCGACAACACTAT GTGGCAAAAATAAAGTATTCGAAATGACATTTGCTAATATATTAGATGAATGTTTTGTTGGTATTTAGAGATTGTGTTTGGAATAACCACTTTTTATTTG GGGAAAAAATGCTTGACAGTTTAAATTGGTTATAAAAAACGTTCAAATCTTGCTTGTTAAAT
• Tissue: pods
• Gene name: LI_gene_180380;
• Additional information: -

Expression of Ll_transcript_515371

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.2
• PS2: 0.2
• PS3: 0.3
• PW1: 0.1
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_515371

• Blastp: Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 30.03% of identity
• Blastx: Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 43.01% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_004499522.1)
• Pfam: gag-polyprotein putative aspartyl protease (PF13975.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;