| Id Trinity | TRINITY_DN50840_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_515373 |
| Sequence | TCTAGGAGTATAGTTAATGTGCCTCTGCAGCTGTACTAATATTATACCTCTAACTATTGTTGTTACCCCTTTCATTTTGATGTCTTATCTTCATACTGCT TCTCTTTGGTTGATGAGCTGGTGTGAATTCCTGAATACTTCGTCTTTGTGATAAACTCTTTTTTGCAGAATTTTGATGATGTATTGGTTCCTGAAGGCCA TGTGAGTAGGAGCTTAAATGATACATACTACATAGACCCTCAAACTGTTTTAAGGTGCCATACAAGTGCTCATCAGGCAGAATTATTGAGAGCTGGGCAC ACCCATTTCCTTGTTACAGGCGATGTTTATCGCAGGGATTCAATTGATTCAACCCATTATCCTATCTTCCATCAGATGGAAGGCTTTCGGGTTTTTGTTC CAGATGAATGGGAGGCATCTGGAATGGATGCCACGTCATTTGCAGCAGTAGACTTAAAGAAATGTCTTGAGGGCTTAGCACGTCATTTATTTGGTGCTGT TGAAATGCGCTGGGTGGATACCTATTTCCCATTTACTAATCCATCCTTTGAACTTGAAATATATTTCCAGGAAAAGTGGTTAGAAGTTTTAGGCTGCGGA GTGACAGAGCAAGAGATTCTAAATAGAAATGGGAAACCAAATAATGTTGCTTGGGCTTTTGGTCTAGGATTGGAGAGGTTAGCAATGGTTCTATTTGACA TACCAGATATTCGTCTCTTTTGGTCAAATGACGAGCGATTTACCTCCCAGTTCTCCAAGGGCCAACTGGGAGTTAAATTTAAGCCATTTTCAAAGTTTCC TCCTTGTTTCAAGGACATCAGTTTCTGGATCAATGAATCATTTACTGAAAATAATCTGTGTGAAGTTGTCAGAGGAATAGCTGGCGATCTTGTAGAAGAG GTGCAATTGATAGACAATTTCACCAACAAGAAAGGATTGACCAGTCATTGCTATAGGATTGCATATAGATCTATGGAACGTTCTCTTACTGATGAAGAAA TTAACGATCTGCAGTGGAAAGTAAGAGAACAGGTGCAGAGCAAACTGAATGTTGTCATAAGATGAGCTTAACATTATACACATTTGCTGTCTCTGTTCAT ATTTTTACCTCCACAGCAACCGAATCACTCCATAGACAAATGTATTACTGAGTTCTTTTCAACATCAACATGGGTTGGTTCAAATCTTGCTTGTTAAATT ATGCACATCTGTTAGATTTTTTAACCCATTTGGTTATTTTTTTATTCTCATCCGACAACACTATGTGGCAAAAATAAAGTATTCGAAATGACATTTGCTA ATATATTAGATGAATGTTTTGTTGGTATTTAGAGATTGTGTTTGGAATAACCACTTTTTATTTGGGGAAAAAATGCTTGACAGTTTAAATTGGTTATAAA AAACGTTCAAATCTTGCTTGTTAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_180380; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_515373
| Blastp | Phenylalanine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 81.3% of identity |
|---|---|
| Blastx | Phenylalanine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 83% of identity |
| Eggnog | phenylalanyL-tRNA synthetase, alpha subunit(COG0016) |
| Kegg | Link to kegg annotations (AT3G58140) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419283.1) |
| Pfam | tRNA synthetases class II core domain (F) (PF01409.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |