Ll_transcript_515376

• Id Trinity: TRINITY_DN50840_c1_g1_i5
• Name Transcript: Ll_transcript_515376
• Sequence: CATGGGGCAAGGTCACAAAATCTGAACCTTCAGTTTTTTCGTCATCATATATCAACGGCTGATATTGAATGGAGTACCCATAGAGAACAGAGAAAAAAGA GCATATAAAAATAGAGTGGTGAGTGGATAATAAAATATAAGGTACGGGACTGAATCACTCATTCCATCAATATTCACAAACAAAATCCCACTGCTATCAT ATCATCTAGCTTGACCTGAACACTGGATGGGATAAGAGCTTAACGAGTGGTTAGATTGCTTTGTCGGGCCTATTTCTGTATACTTTACTGTGCAACTAAC ATAGCTACTTAAAAATATAAACTTACTTGCTTGGCAATGATGATATCTTCTATGCAAGCCACACTTTTTGGCAAGGCCTCTTTCTTTCGTCAAAGTAGCA GCTTAAGAAGCTTAACATTTTTTGTGCCTTTCTCTTCATCCACTGCTTCGGTTTCTGCTGACAACCTTTCAAGGAAGAAATGGAGGCAACCAGTTTTCTC GGCATTGGAGCTTGGTGGAGTCAAGGTTAGCAGAGAAGATGTGGTGAAGGATGACCCTACAAATAACGTGCCCGACTCGATATTTTCAAAACTTGGACTG CAGCTTCACAGGAGGGATCAACACCCACTTGGCATACTGAAGAATGCAATATACGATTATTTTGACACAAATTATTCAAATAAGTTCGATAAGTTTGACG ATCTTTGTCCTATTGTGTCAGTGAAACAGAATTTTGATGATGTATTGGTTCCTGAAGGCCATGTGAGTAGGAGCTTAAATGATACATACTACATAGACCC TCAAACTGTTTTAAGGTGCCATACAAGTGCTCATCAGGCAGAATTATTGAGAGCTGGGCACACCCATTTCCTTGTTACAGGCGATGTTTATCGCAGGGAT TCAATTGATTCAACCCATTATCCTATCTTCCATCAGATGGAAGGCTTTCGGGTTTTTGTTCCAGATGAATGGGAGGCATCTGGAATGGATGCCACGTCAT TTGCAGCAGTAGACTTAAAGAAATGTCTTGAGGGCTTAGCACGTCATTTATTTGGTGCTGTTGAAATGCGCTGGGTGGATACCTATTTCCCATTTACTAA TCCATCCTTTGAACTTGAAATATATTTCCAGGAAAAGTGGTTAGAAGTTTTAGGCTGCGGAGTGACAGAGCAAGAGATTCTAAATAGAAATGGGAAACCA AATAATGTTGCTTGGGCTTTTGGTCTAGGATTGGAGAGGTTAGCAATGGTTCTATTTGACATACCAGATATTCGTCTCTTTTGGTCAAATGACGAGCGAT TTACCTCCCAGTTCTCCAAGGGCCAACTGGGAGTTAAATTTAAGCCATTTTCAAAGTTTCCTCCTTGTTTCAAGGACATCAGTTTCTGGATCAATGAATC ATTTACTGAAAATAATCTGTGTGAAGTTGTCAGAGGAATAGCTGGCGATCTTGTAGAAGAGGTGCAATTGATAGACAATTTCACCAACAAGAAAGGATTG ACCAGTCATTGCTATAGGATTGCATATAGATCTATGGAACGTTCTCTTACTGATGAAGAAATTAACGATCTGCAGTGGAAAGTAAGAGAACAGGTGCAGA GCAAACTGAATGTTGTCATAAGATGAGCTTAACATTATACACATTTGCTGTCTCTGTTCATATTTTTACCTCCACAGCAACCGAATCACTCCATAGACAA ATGTATTACTGAGTTCTTTTCAACATCAACATGGGTTGGTTCAAATCTTGCTTGTTAAATTATGCACATCTGTTAGATTTTTTAACCCATTTGGTTATTT TTTTATTCTCATCCGACAACACTATGTGGCAAAAATAAAGTATTCGAAATGACATTTGCTAATATATTAGATGAATGTTTTGTTGGTATTTAGAGATTGT GTTTGGAATAACCACTTTTTATTTGGGGAAAAAATGCTTGACAGTTTAAATTGGTTATAAAAAACGTTCAAATCTTGCTTGTTAAAT
• Tissue: pods
• Gene name: LI_gene_180380;
• Additional information: details;

Expression of Ll_transcript_515376

FPKM

• PAB: 13.6
• PNAB: 22.9
• PS1: 17.4
• PS2: 13.3
• PS3: 17.8
• PW1: 21.4
• PW2: 21.6
• PW3: 16.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_515376

• Blastp: Phenylalanine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 75.64% of identity
• Blastx: Phenylalanine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 75.64% of identity
• Eggnog: phenylalanyL-tRNA synthetase, alpha subunit(COG0016)
• Kegg: Link to kegg annotations (AT3G58140)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419283.1)
• Pfam: tRNA synthetases class II core domain (F) (PF01409.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;