Ll_transcript_516085

• Id Trinity: TRINITY_DN50846_c2_g1_i1
• Name Transcript: Ll_transcript_516085
• Sequence: CGCGGTATAGTTCATGATTCTGCAACTCACTTTAATGATCTTTTTCACACAATCCCAAACCAAATCATCACAAACCCAGAACAAAAACGTTGAAAAGTTT TCACCTTGATTTGAAAAAAGTGATTTTTGTGTAAAATCTTAATCCAATGGAGAACAGGGTTCATTGCCCAGAGAATGAGGAACTGGCATCATACATGTGG AACAAATGGAAGGAAATGGCAGAGAAGCCGAAAGGGATTTCGGATAACATAGAAATGGCACTCTCTAAGGCTCACTTAAATGTTTGTAACTCCAAAAACC CAATTCTAACTATCAAAGATTTTTCTCAGGTCAAGGGTGTTGGTAAAATGATTCTGAAGCTTATGCAGGGGTTTTTTGGGACCACTTCAGAAGTTTCTGA ACCAGATGGCTTGACCAAAAAGGGAAAGACAACTAAAGGAACCAAGCGCTATATGCCTCAGAGGAACTCTGTAGCATACGCACTGTTGATAACCCTTTAC AGGGGAACTTCAAATGGAAATGAATTTATGCGTAAACAGGAACTTATCGACGCTGCTGAAGCTAGTGGGCTGTCTCGAGTGCCAATTCTGCCAGAAAAAG GGAAAGGGAAGCCTGGCCATTTTGGAAGTTCTCCACGGGAATGGTATAGTGGATGGAGCTGCATGAAGACACTGGTAACTAAGGGATTAGTTGTAAGATC AAGTTGTCCAGCAAAGTATATGCTAACTCAAGAAGGTAAGGAAGCAGCATGTGACTGTCTTAAAAGATCTGGAATGACAGAATCTCTGGAGAAGTCAGTT TCTGTTGAAATTTCATCTTATATCGATAAACAGAACTCCTTAGATAAGGAACTGGAGGGTCATGATTCGGAATCAGAAGTGATGTCCCCATTGACCCAGC AAAAGAAGCCAATGGGTGTTCCTCTTGATTCCCTTGAGAGGTTTACAAGAATGGGTTACTCCAAGGAACAAATTGTTAGTGCTTTCACTGAAGTTTCCAG AAGCTATCCAAATAAAGATGTCTCATCTCTGTGGCCAGCTGTTTTATGTCATCTTCGAGGGGAGCAAGTCTATGGTCCACAGCCCGAATTGCAAACTAAT ATAAATAATTGCCATATGATAAGTGGTTCCAGTGACCTCATTGGAAACGAGAGAAGAACTGTGAGTTCATCCCGTGGTGGGCATGTGTCAAATTCCCGTT CTCTTGATATTCCATCGTTTCCCTTGAGAGCTTGCTCATCAAATGCAGATCCCTTGGAAAAGCCGAACAAAGACGAGCTTGAATCAAAGATGAACATTTT AAGTGTTCCACCATTGAGCTTGGGGGATAGATTTGAGGATGTCTACGAAGTGATTTTAATTTTGGATGATCGGGAGCAGTTTGCCACTCAGGGATCAAGA GCTAGGAAAATTATTGAGAATATCCGCCGCGAATTCAAAATTCAAATAGAGGTTCGGCGATTACCAGTTGGAGATGGGATTTGGATAGCGCGCCATAAAA CTCTCGATACTGAATATGTATTGGATTTTATTGTTGAGAGGAAACATATTGATGATTTACGCAGTTCAATCAGGGATAACCGCTACAAGGATCAAAAAAT AAGACTTCTGAGGTGTGGACTGAAGAAGCTGATATATCTTGTGGAAGGTGACCCAAATGCTTCTGAAGCTGCCGAAAGCATAAAAACTGCTTGTTTTACA ACAGAGATTCTAGAGGGATTTGATGTGCAGAGAACAAGTGGCTTGGGTGATACCCTAAGGAAGTACGGTTATCTTACCCAATCAATTTTCCAATATTACA AGTCAGGAGTTTTTGAAGACCATCTCAAATTCTCTGGGACATGTCCTCCCTTTAAAAAATTTATTAGACAGTGCCAAGACATGGAAAAAATGACAGTTAG TGATGTATTTGCCATCCAGCTTATGCAGGTCCCACAGGTTACTGAGGAAGTTGCCATGAATGTGTTGGATTTGTACCCTACACTTATGTCTCTTGCTCAT GCCTACTCACAACTTGATGGCGATGCTCGTGCCCAGGAGGAGATGCTTCGAACTCGGAGTAACGATGTGATCAATGCAGTTGCCAGTAGGAATATTTTCC ACTTTGTTTGGGGCAACTGACTTGTATTTCCCCCTCAAAGATGGGTTTTCAGATGTGAATTCACTAAGCATAGGGTGACAACAATGTTCTTTTTTTTTTA CTTAAGCAACTTGTAGTTGTTGTATATGTATATAAAATTAAGTATGATTTACAGTAATGCATAGTGACAAGCAATAAAAAAAATACTTTTT
• Tissue: pods
• Gene name: LI_gene_180430;
• Additional information: details;

Expression of Ll_transcript_516085

FPKM

• PAB: 0.1
• PNAB: 1.8
• PS1: 1.5
• PS2: 1.1
• PS3: 1.5
• PW1: 0.5
• PW2: 0.6
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516085

• Blastp: Crossover junction endonuclease MUS81 from Arabidopsis with 56.55% of identity
• Blastx: Crossover junction endonuclease MUS81 from Arabidopsis with 56.55% of identity
• Eggnog: Excision repair cross-complementing rodent repair deficiency, complementation group 4(COG1948)
• Kegg: Link to kegg annotations (AT4G30870)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427613.1)
• Pfam: ERCC4 domain (PF02732.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;