Ll_transcript_516086

• Id Trinity: TRINITY_DN50846_c2_g1_i2
• Name Transcript: Ll_transcript_516086
• Sequence: CGCGGTATAGTTCATGATTCTGCAACTCACTTTAATGATCTTTTTCACACAATCCCAAACCAAATCATCACAAACCCAGAACAAAAACGTTGAAAAGTTT TCACCTTGATTTGAAAAAAGTGATTTTTGTGTAAAATCTTAATCCAATGGAGAACAGGGTTCATTGCCCAGAGAATGAGGAACTGGCATCATACATGTGG AACAAATGGAAGGAAATGGCAGAGAAGCCGAAAGGGATTTCGGATAACATAGAAATGGCACTCTCTAAGGCTCACTTAAATGTTTGTAACTCCAAAAACC CAATTCTAACTATCAAAGATTTTTCTCAGGTCAAGTATGTATTATTTTTTCCCCATATTATACTTTTGTTTATGTATTGAAAAGTATGCCAAACTTTCAT TTTCAGCTTTTTTTAATTTTGTTTTTGTTGTTGTGTGGCATTGGCATATGTGGAATTTGAATGGTGGAATGTTATTGTAATATAGGTTGTTTGCCCATAA TCTAATCCCAGCACTTTTGTTTAAGCTTTCTTTACACAGGAAAAAGTGATTGCTCTCACGTTTACATGTTTGTTTGATTTAAAAGTTGAAAAAATTACCT GAAACTCATCTGTTATGAAAAGCTATATTTTTCAGTTTCTAAAAAACACTTTTTGTGGAAACATATTTTTATAGTACCTTAGACTCACTCTTTCTAACTC CTTAGTCCCTGAAAAATTAGAAATATCCCAATTTGATGCCTAGAAATCTCAAATGACTGTCAGAAAGTTTCATAGGGACTAATGTGTCCTCGGCATTTCT GATTTTTCAAAACCAAGTTAGACTTTTTATTATGATTTTTTGTTTTTGTCAAAGACTACATCGGGGAGAACTTTTTTTCTCAGGGATGAATTTGGTATTC ACCCAGTCACTCTTAATGATGTGTTTGCATTTTGTAAATTGATTGGTGAGCTTGTCTTCCACAGTTCCACATTGTATTTTTTTAACGTGAAAATTTTCCT GATATGTTTCTTGTGATAAAGTTATCCAGATTTTGAGATATCCTTTTTGGACCTTGAAAGCTTGAACTTTAGTCTAAAAAGGGTTGTTTGGTTGGGTTTT TACTTATTGGTTAGTTCTCTGTGTTTGTAAACTAACAAGGGTAAATGATAAACTAAGTTAGTTTTTTTTTTTAAATTTTATTATTGACGTTGTTCTGAAC TAATGAGGTTCTTTGTTGTATATGAAATTGTGGTGAAGGGGTGTTGGTAAAATGATTCTGAAGCTTATGCAGGGGTTTTTTGGGACCACTTCAGAAGTTT CTGAACCAGATGGCTTGACCAAAAAGGGAAAGACAACTAAAGGAACCAAGCGCTATATGCCTCAGAGGAACTCTGTAGCATACGCACTGTTGATAACCCT TTACAGGGGAACTTCAAATGGAAATGAATTTATGCGTAAACAGGAACTTATCGACGCTGCTGAAGCTAGTGGGCTGTCTCGAGTGCCAATTCTGCCAGAA AAAGGGAAAGGGAAGCCTGGCCATTTTGGAAGTTCTCCACGGGAATGGTATAGTGGATGGAGCTGCATGAAGACACTGGTAACTAAGGGATTAGTTGTAA GATCAAGTTGTCCAGCAAAGTATATGCTAACTCAAGAAGGTAAGGAAGCAGCATGTGACTGTCTTAAAAGATCTGGAATGACAGAATCTCTGGAGAAGTC AGTTTCTGTTGAAATTTCATCTTATATCGATAAACAGAACTCCTTAGATAAGGAACTGGAGGGTCATGATTCGGAATCAGAAGTGATGTCCCCATTGACC CAGCAAAAGAAGCCAATGGGTGTTCCTCTTGATTCCCTTGAGAGGTTTACAAGAATGGGTTACTCCAAGGAACAAATTGTTAGTGCTTTCACTGAAGTTT CCAGAAGCTATCCAAATAAAGATGTCTCATCTCTGTGGCCAGCTGTTTTATGTCATCTTCGAGGGGAGCAAGTCTATGGTCCACAGCCCGAATTGCAAAC TAATATAAATAATTGCCATATGATAAGTGGTTCCAGTGACCTCATTGGAAACGAGAGAAGAACTGTGAGTTCATCCCGTGGTGGGCATGTGTCAAATTCC CGTTCTCTTGATATTCCATCGTTTCCCTTGAGAGCTTGCTCATCAAATGCAGATCCCTTGGAAAAGCCGAACAAAGACGAGCTTGAATCAAAGATGAACA TTTTAAGTGTTCCACCATTGAGCTTGGGGGATAGATTTGAGGATGTCTACGAAGTGATTTTAATTTTGGATGATCGGGAGCAGTTTGCCACTCAGGGATC AAGAGCTAGGAAAATTATTGAGAATATCCGCCGCGAATTCAAAATTCAAATAGAGGTTCGGCGATTACCAGTTGGAGATGGGATTTGGATAGCGCGCCAT AAAACTCTCGATACTGAATATGTATTGGATTTTATTGTTGAGAGGAAACATATTGATGATTTACGCAGTTCAATCAGGGATAACCGCTACAAGGATCAAA AAATAAGACTTCTGAGGTGTGGACTGAAGAAGCTGATATATCTTGTGGAAGGTGACCCAAATGCTTCTGAAGCTGCCGAAAGCATAAAAACTGCTTGTTT TACAACAGAGATTCTAGAGGGATTTGATGTGCAGAGAACAAGTGGCTTGGGTGATACCCTAAGGAAGTACGGTTATCTTACCCAATCAATTTTCCAATAT TACAAGTCAGGAGTTTTTGAAGACCATCTCAAATTCTCTGGGACATGTCCTCCCTTTAAAAAATTTATTAGACAGTGCCAAGACATGGAAAAAATGACAG TTAGTGATGTATTTGCCATCCAGCTTATGCAGGTCCCACAGGTTACTGAGGAAGTTGCCATGAATGTGTTGGATTTGTACCCTACACTTATGTCTCTTGC TCATGCCTACTCACAACTTGATGGCGATGCTCGTGCCCAGGAGGAGATGCTTCGAACTCGGAGTAACGATGTGATCAATGCAGTTGCCAGTAGGAATATT TTCCACTTTGTTTGGGGCAACTGACTTGTATTTCCCCCTCAAAGATGGGTTTTCAGATGTGAATTCACTAAGCATAGGGTGACAACAATGTTCTTTTTTT TTTACTTAAGCAACTTGTAGTTGTTGTATATGTATATAAAATTAAGTATGATTTACAGTAATGCATAGTGACAAGCAATAAAAAAAATACTTTTT
• Tissue: pods
• Gene name: LI_gene_180430;
• Additional information: details;

Expression of Ll_transcript_516086

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.2
• PS2: 0.1
• PS3: 0.2
• PW1: 0.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516086

• Blastp: Crossover junction endonuclease MUS81 from Arabidopsis with 56.86% of identity
• Blastx: Crossover junction endonuclease MUS81 from Arabidopsis with 56.79% of identity
• Eggnog: Excision repair cross-complementing rodent repair deficiency, complementation group 4(COG1948)
• Kegg: Link to kegg annotations (AT4G30870)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427613.1)
• Pfam: ERCC4 domain (PF02732.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;