Ll_transcript_516116

• Id Trinity: TRINITY_DN50846_c4_g2_i10
• Name Transcript: Ll_transcript_516116
• Sequence: ACCAACCACACCACACCACACACGAAAACACAGCACACTCCATCTTCTCTTCTCTTCTCTTCCTCGTGACTAACCATTTACAATTCTCCCTCTCTTCTGC ATATTCTATGAATCTTTCTCTCTCCATCTTCTCTTTCTCTCTCTAAATCCACTCTCATCTTTCTCTCTCTTAAGCGGTTCCCGTTTCAGAACATAAACAA TGGAGTCGCCGGAATCGTCCTACGAGTCTTCACCGGAAGGAAAAAGGAACCACACTTCGTCTCCGCCTATTTCTCCAACTCATGATTCTGAGGAGAAGCC AACATATGTTAGATTTCTTGTATCGAACTCTGCAGCTGGTTCTGTTATTGGAAAGGGCGGATCAACTGTCACTGATTTTCAGTCACAGTCTGGAGCACGA ATCCAGTTGTCACGCAATCATGAATTCTTTCCTGGAACTAGTGATAGGATTATCATGGTCTCTGGAACGATAAATGAAATACTAAGTGCTTTAGAACTTA TTCTTTCTAAGTTGCTCAGTGAGCTTCATATTGAGGATGGCAATGATGCTGAGCCAAAAACGAAAGTGAGACTCATAGTTCCAAATGGTTCTTGTGGTGG AATAATTGGAAAGGGAGGTGCTACTGTTAGGTCATTCATTGAAGACTCTCAGGCTGGCATTAAGATATCTCCACAAGATAATAATTACTTTGGATTGAAT GATAGACTAGTGACAGTGACAGGAACTTTGGATGAGCAGTTGCATGCAGTTGATTTAATTGTTTCTAAGCTATCTGAAGATGCTCATTATTCCCAGTCAA TTAATTCTCCGATGTCATATCCAGGTGTTTCCCCTTCAGGCTATCATGGTGCTCCATATGTGCTTCCTTCTGGTTCAACCACTGCATACAATCCATCGAG CCACGTAACAAATGGTGCTGGAAGGAAGTTTGAGAATAACAAGGAGGATCGGAGCAACTCAGTGACCATTGGTGTTCTAGACGGACATATAGGATTTGTC GTTGGTCGCGGTGGAAGGAATATAATGGAAATTAGTCAGACTAGTGGAGCAAGGGTAAAGATATCTGATAGAGGTGATTATATATCAGGAACAACTGAGA GGAAAGTTACCATAACCGGATCCCAGAGAGCAATACGTACTGCCGAATCGATGATATTGAAGAAGGTTGCTTATGCTGCTGAGAAGGCGATCGAAGTTGA ATGATTGTCAAGTACGATTGTCCTAACCTTGAGATACTCCCTAAAACTTCTTGGTAATTGGTTATACATTTCCTATTTTTGGGATTTGTTGATATAAGTT ATCGTCACATACCATGAGAGATCTTAAAATTGTACTGGTTGACCTTGCTTTATCTTTTTAATTTGATTGAGATTGGCCTTATAGGAATTCATGGCAAACA ACTTTTTCAAGGACAAGATCTTTTGAGAAGGCCATGACAATGTAGAATCTAGAAGCACATTCTTTTGTTGCAAGTCGAAACTAGGCAAAATATCATGTCC AATCTGTATCTTCAGTTACTTACTGCCTTAAAATTGAGTTGACTTTAATTCTCCATTGTGATTTCATAGCTACCATCATCATTTCCTTGAAGTGAAACTT GAATTATTTGGGTCCTTTTCAATTGTGTTTATGTTATTAGGTTGGGTTTTCATCAAATTGGTCATTTAATATGTAACCAAATTAGTTTTAAATGGATATC AAGTTTATCTATAAAAGGAGGACTGTGCTAACATTTAATTATCACACTGAATGATCAAAGTTTCATTCAATATCCTGTTTTGAATATTGAAGGTCAAATG CAAAGATGGAGAAATCTTCCAGGATCAAAGAATGAACATTTGCTCTGTTATCTCTTGTTAACCGTTTATATTACAAAGATTTCCCCTGACCTTTTTGTGA AGCCTCAAATGTCCCGTAGGGTGTGTTTGTTAGTTAAATTTCGGAGGGGAAGAAAAATAAATGAAAATTAGAGAGTCATATCTTCTTTTTTCATTCCCTC TATTATTCTTTAAAGGGGAGGGATCAAGTTACTCCAAGAATAAGTTTAAAAGACTTACTCTTCATCTTATACCATCAATTCTAG
• Tissue: pods
• Gene name: LI_gene_180434;
• Additional information: details;

Expression of Ll_transcript_516116

FPKM

• PAB: 15.3
• PNAB: 17.8
• PS1: 11.5
• PS2: 12
• PS3: 14.2
• PW1: 15.4
• PW2: 13.4
• PW3: 10

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516116

• Blastp: Protein BTR1 from Arabidopsis with 60.79% of identity
• Blastx: Protein BTR1 from Arabidopsis with 62.34% of identity
• Eggnog: Neuro-oncological ventral antigen(ENOG410XRZD)
• Kegg: Link to kegg annotations (AT5G04430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461721.1)
• Pfam: KH domain (PF00013.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;