| Id Trinity | TRINITY_DN50846_c4_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_516109 |
| Sequence | ACCAACCACACCACACCACACACGAAAACACAGCACACTCCATCTTCTCTTCTCTTCTCTTCCTCGTGACTAACCATTTACAATTCTCCCTCTCTTCTGC ATATTCTATGAATCTTTCTCTCTCCATCTTCTCTTTCTCTCTCTAAATCCACTCTCATCTTTCTCTCTCTTAAGCGGTTCCCGTTTCAGAACATAAACAA TGGAGTCGCCGGAATCGTCCTACGAGTCTTCACCGGAAGGAAAAAGGAACCACACTTCGTCTCCGCCTATTTCTCCAACTCATGATTCTGAGGAGAAGCC AACATATGTTAGATTTCTTGTATCGAACTCTGCAGCTGGTTCTGTTATTGGAAAGGGCGGATCAACTGTCACTGATTTTCAGTCACAGTCTGGAGCACGA ATCCAGTTGTCACGCAATCATGAATTCTTTCCTGGAACTAGTGATAGGATTATCATGGTCTCTGGAACGATAAATGAAATACTAAGTGCTTTAGAACTTA TTCTTTCTAAGTTGCTCAGTGAGCTTCATATTGAGGATGGCAATGATGCTGAGCCAAAAACGAAAGTGAGACTCATAGTTCCAAATGGTTCTTGTGGTGG AATAATTGGAAAGGGAGGTGCTACTGTTAGGTCATTCATTGAAGACTCTCAGGCTGGCATTAAGATATCTCCCCAGGACAATAATTACTATGGACTGAAT GATAGGCTAGTGACGGTGACTGGAACTCTTGATGAGCAGATGCGTGCAATTGATTTAATTATTTCAAAGTTAGCTGAAGATCCTCATTATTCACAGACCA TGAATTCTCCGTTTTCATATCCAGGTGTTTACTTCTCTGGTTATCAGGGTGTTCCATATACATATGTGCTTCCATCTGTTGGACCACCGGCATACAATGC AGTGAACTACAGAGCAAATGGTGCTGGAGGGAAGTTCCAGAGTAGCAAGGTTCTTCTTATTCCATTAATTTAATGTTGCTGATTGTTTCTCATGTTATAA AGTGACAAGTTTTCAAACAAAAAATAAAGAAGATGATGAATTCTATATTTTGTTCTAGAGGAAGCTGATAGGATCTGTGACCCATGAAAGAGGCCAAATG TTAGGACATGTGGATAGGGATATTCTAGATGAAAGGAGAGTCGGGCCAAAGTTAGTTTTGATTATTGTCTAAGAGAGAGTGTAAGAAAGGAATGGGGGTA AAGAATACTTTCGGTTATTAATAGGCTGAGTGGGAGAGAGAGGATGCATCTTTTGGGAAATCACTTATTAGTATGGGCAGAGAGTATTAGCTCTTTGTAG GAGTCTAGCTCCCTGGCAGTTGGTACTTATACCACTGTAATTACATTCATTTTCCAGTAATCAGTACAGTTTTCCTTTATTTGTTGAATTGTTCATATTG TTTCTGGATCTTCGTTACGTGTTCGTATCAGAGGCTGATCAACATGCATTGTGAAAACGTGAAAATTAGAAATGACCTAAGAAAGGTATAATAGAAACCA TTCAAGAAGACCTAGTTCTACATGGCGTTGCTGAAAATATGGTTTTTATAGACAATAGTAGAGCCCAATGGTGTCATTGATCTACGTTACTGGCTTCACC CAATGGGAGGCTTAGTCAGAAGGAGGAAAACATTCGGGATGTCATTGTTGAGGCCAGTAAGTGATCTTTCAATCATGTTGCTTAGTGTAGGAGGACTTTG GGATGTGATGATGCAGTATAATGACAAGATCTAGTTGAAGGCCTAGATAACTTTCAGCTTGTGATTTTTATACAAACTATGTCACGAGAAGACTGTCTTC CCTCCCAAAAAGAGGTAGTATTTACTCTTGCAACATTTGTGGAAAGCCTCTCTCAATACAAGGCATCGAAAGAGCTTTATCTAAGAGGACAAAGGTTCAA ACAATTTGCTTTTGATTTGGTCGAGAAACATAGTATAACTAGGCTGCAAGATAACGTGTTAGATTAAGACCTCTTCTTATGTGACTCAAATAGGAACAAT GTGGTTTTGATTTGGCAAGGATCTTGCAAATGCAGCCATCTCTATTTGGGTTAGCACAATGAGATCCTAGTGGAAGTTATTTTACTTTATGGCTAGCTCA GTCATCACCCTTCGAACTATGTCTTTTCCACACATGACCAAATTCTAAGGCGCAACCCTAACATCTTTATACAATAAAAGCTATCTTCAACCTTTTCCCT AATGCATTCATTCATAATCCTATCTCCTCTAGTGTGTCCATTTATCTAATACAACATTCTCATATCAGCCACATCCAAACAAATAAATACAACAATTAAT TGGCAATTCCTGCTTTTGAATCAGAAAAAAAGAACACGAAATAATTACTATTTCCATTGAAACACAACCTTGCAGAATGGAAAGGATAATCCTTGACCTC TATGAATACTAACATTAGAACGGAATAAAAATCATTTATGACATTTGCATCCCTTGAGATTTAGACATTTAGTTATCCAGCTTTATGATGTCCATCAGTA GGTGAATAATATCTCATAACTATGGTTTTGGCAAGTATTTAAAGGTAATGATAGTAATCTTTTTGCAGCTAAATTGACTGAGTTGACATGCACTTCGAAA TTGTGTAGGGAGTAATATTATACTCTAGCCATTGCCACTTCATGGTTGTTATATATAGGAACCTATTCATTCATTTTGTATTATGAACTTCGATTTTAGG CAAAGAACCGTTATCATATTTTTTTTAACCGCAGCGTAAAATATAACTGAAATCTTCCACATTTCATCTGATTGATTCAACTTGTGCTCTTAACCTAGCT GTATAAGGTTTTTGACCAATGCCTATGTAAAGGCTTGGTCCATAATTATTATGAACTTGTGCTCTGAATCTAGCTTTAGATGGTTTTTGAGGGATCCAAT ACCATTTGTTTCTTCACTTTTGTTGCATATCATACTTATTTTATTTTAATTTATTTTAGGAAATATTTTCTTAATTGCATGAAATCCAACATGTTACATG GGATTATTGTCTATAATCAGTGAATTTGTATTAAAGAAATGTAGTAAATGAAAAAAAAATCCTAACTTCCTGTTTAAATCCTTGCATCTTCATCTAATGG TGGTTAAGTGGTTTGCTCTGTCAATTTGAACTAAACAGATGTTCTTATTTTGTTTTCCAGGAAGAGCAGAGTACCTCGCTGACCATTGGTGTTGCAGACG ACCATATAGGATTGGTTGTTGGTCGCGGTGGAAGGAATATAATGGACATTAGTCAGAATAGTGGGGCAAAGATAAAGATATCAGATAGAGGTGATTACAT ATCTGGAACAACTGACAGGAAAGTTACCATAACAGGGTCCCAGAGAGCAATTCGTACTGCCGAATCGATGATATTGCAGAAGGTTGCGTACGCTACTGAG AAGGCCGATGAGTAGTTTTCGACTGAACTCATCTACTGCTGCTGTGCTAGATGCTTAGTGAACCTCTGCCTGTTAATTGCTTATGCATGTGCTGAATTTT GGGATTTGTTTACATAAATTTGGAGTATGGAGATATTTACTGTAGTGGGAAAGGACAGGTTTTAATTTATTTAATTTAATTTGGTTGGTCTTATAGGAAA TGGCTTTATGTGGCCTTTTCCAAATGTAGTATTCTTTTGTTGTATGTCAACTGTATCTTCAATTACTGCTCTAAGATATGATTTAAAACTATTCATTTGC TGTGATAGAACTTTAGAATTGATCAGGATTATTCTGCCTGAAGCTATATTTTCCAAGTGACTTAAAGATTAGACTGCAAAATTTCTCATTAGTTGTTTAT ATTCCTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_180434; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_516109
| Blastp | Protein BTR1 from Arabidopsis with 61.2% of identity |
|---|---|
| Blastx | Protein BTR1 from Arabidopsis with 63.32% of identity |
| Eggnog | Neuro-oncological ventral antigen(ENOG410XRZD) |
| Kegg | Link to kegg annotations (AT5G04430) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441001.1) |
| Pfam | KH domain (PF00013.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |