Ll_transcript_516112

• Id Trinity: TRINITY_DN50846_c4_g2_i7
• Name Transcript: Ll_transcript_516112
• Sequence: ACCAACCACACCACACCACACACGAAAACACAGCACACTCCATCTTCTCTTCTCTTCTCTTCCTCGTGACTAACCATTTACAATTCTCCCTCTCTTCTGC ATATTCTATGAATCTTTCTCTCTCCATCTTCTCTTTCTCTCTCTAAATCCACTCTCATCTTTCTCTCTCTTAAGCGGTTCCCGTTTCAGAACATAAACAA TGGAGTCGCCGGAATCGTCCTACGAGTCTTCACCGGAAGGAAAAAGGAACCACACTTCGTCTCCGCCTATTTCTCCAACTCATGATTCTGAGGAGAAGCC AACATATGTTAGATTTCTTGTATCGAACTCTGCAGCTGGTTCTGTTATTGGAAAGGGCGGATCAACTGTCACTGATTTTCAGTCACAGTCTGGAGCACGA ATCCAGTTGTCACGCAATCATGAATTCTTTCCTGGAACTAGTGATAGGATTATCATGGTCTCTGGAACGATAAATGAAATACTAAGTGCTTTAGAACTTA TTCTTTCTAAGTTGCTCAGTGAGCTTCATATTGAGGATGGCAATGATGCTGAGCCAAAAACGAAAGTGAGACTCATAGTTCCAAATGGTTCTTGTGGTGG AATAATTGGAAAGGGAGGTGCTACTGTTAGGTCATTCATTGAAGACTCTCAGGCTGGCATTAAGATATCTCCCCAGGACAATAATTACTATGGACTGAAT GATAGGCTAGTGACGGTGACTGGAACTCTTGATGAGCAGATGCGTGCAATTGATTTAATTATTTCAAAGTTAGCTGAAGATCCTCATTATTCACAGACCA TGAATTCTCCGTTTTCATATCCAGGTGTTTACTTCTCTGGTTATCAGGGTGTTCCATATACATATGTGCTTCCATCTGTTGGACCACCGGCATACAATGC AGTGAACTACAGAGCAAATGGTGCTGGAGGGAAGTTCCAGAGTAGCAAGGTTCTTCTTATTCCATTAATTTAATGTTGCTGATTGTTTCTCATGTTATAA AGTGACAAGTTTTCAAACAAAAAATAAAGAAGATGATGAATTCTATATTTTGTTCTAGAGGAAGCTGATAGGATCTGTGACCCATGAAAGAGGCCAAATG TTAGGACATGTGGATAGGGATATTCTAGATGAAAGGAGAGTCGGGCCAAAGTTAGTTTTGATTATTGTCTAAGAGAGAGTGTAAGAAAGGAATGGGGGTA AAGAATACTTTCGGTTATTAATAGGCTGAGTGGGAGAGAGAGGATGCATCTTTTGGGAAATCACTTATTAGTATGGGCAGAGAGTATTAGCTCTTTGTAG GAGTCTAGCTCCCTGGCAGTTGGTACTTATACCACTGTAATTACATTCATTTTCCAGTAATCAGTACAGTTTTCCTTTATTTGTTGAATTGTTCATATTG TTTCTGGATCTTCGTTACGTGTTCGTATCAGAGGCTGATCAACATGCATTGTGAAAACGTGAAAATTAGAAATGACCTAAGAAAGGTATAATAGAAACCA TTCAAGAAGACCTAGTTCTACATGGCGTTGCTGAAAATATGGTTTTTATAGACAATAGTAGAGCCCAATGGTGTCATTGATCTACGTTACTGGCTTCACC CAATGGGAGGCTTAGTCAGAAGGAGGAAAACATTCGGGATGTCATTGTTGAGGCCAGTAAGTGATCTTTCAATCATGTTGCTTAGTGTAGGAGGACTTTG GGATGTGATGATGCAGTATAATGACAAGATCTAGTTGAAGGCCTAGATAACTTTCAGCTTGTGATTTTTATACAAACTATGTCACGAGAAGACTGTCTTC CCTCCCAAAAAGAGGTAGTATTTACTCTTGCAACATTTGTGGAAAGCCTCTCTCAATACAAGGCATCGAAAGAGCTTTATCTAAGAGGACAAAGGTTCAA ACAATTTGCTTTTGATTTGGTCGAGAAACATAGTATAACTAGGCTGCAAGATAACGTGTTAGATTAAGACCTCTTCTTATGTGACTCAAATAGGAACAAT GTGGTTTTGATTTGGCAAGGATCTTGCAAATGCAGCCATCTCTATTTGGGTTAGCACAATGAGATCCTAGTGGAAGTTATTTTACTTTATGGCTAGCTCA GTCATCACCCTTCGAACTATGTCTTTTCCACACATGACCAAATTCTAAGGCGCAACCCTAACATCTTTATACAATAAAAGCTATCTTCAACCTTTTCCCT AATGCATTCATTCATAATCCTATCTCCTCTAGTGTGTCCATTTATCTAATACAACATTCTCATATCAGCCACATCCAAACAAATAAATACAACAATTAAT TGGCAATTCCTGCTTTTGAATCAGAAAAAAAGAACACGAAATAATTACTATTTCCATTGAAACACAACCTTGCAGAATGGAAAGGATAATCCTTGACCTC TATGAATACTAACATTAGAACGGAATAAAAATCATTTATGACATTTGCATCCCTTGAGATTTAGACATTTAGTTATCCAGCTTTATGATGTCCATCAGTA GGTGAATAATATCTCATAACTATGGTTTTGGCAAGTATTTAAAGGTAATGATAGTAATCTTTTTGCAGCTAAATTGACTGAGTTGACATGCACTTCGAAA TTGTGTAGGGAGTAATATTATACTCTAGCCATTGCCACTTCATGGTTGTTATATATAGGAACCTATTCATTCATTTTGTATTATGAACTTCGATTTTAGG CAAAGAACCGTTATCATATTTTTTTTAACCGCAGCGTAAAATATAACTGAAATCTTCCACATTTCATCTGATTGATTCAACTTGTGCTCTTAACCTAGCT GTATAAGGTTTTTGACCAATGCCTATGTAAAGGCTTGGTCCATAATTATTATGAACTTGTGCTCTGAATCTAGCTTTAGATGGTTTTTGAGGGATCCAAT ACCATTTGTTTCTTCACTTTTGTTGCATATCATACTTATTTTATTTTAATTTATTTTAGGAAATATTTTCTTAATTGCATGAAATCCAACATGTTACATG GGATTATTGTCTATAATCAGTGAATTTGTATTAAAGAAATGTAGTAAATGAAAAAAAAATCCTAACTTCCTGTTTAAATCCTTGCATCTTCATCTAATGG TGGTTAAGTGGTTTGCTCTGTCAATTTGAACTAAACAGATGTTCTTATTTTGTTTTCCAGGAAGAGCAGAGTACCTCGCTGACCATTGGTGTTGCAGACG ACCATATAGGATTGGTTGTTGGTCGCGGTGGAAGGAATATAATGGACATTAGTCAGAATAGTGGGGCAAAGATAAAGATATCAGATAGAGGTGATTACAT ATCTGGAACAACTGATAGGAAAGTCACCATAACAGGATCTCAGAGAGCAATACGTATAGCTGAATCTATGATATTGCAGAAGGTTTCGAATGCTACGGAG CGGGTGATTGAGTAGTTTGCAAGTGCACTCATGTCCTACTTGATGCTTAGTGAACCTTTGTTTGCTAGTTGCTTCTGCATATGCTGAATTCTGGGATTTG TTTTACATAAATTCTCATCACATGATATACTTTGAGATATTTACTGCAGTGGTAGAGGGCATGGTTTTTTTTTAATTTATTTAATTGGGAGTTGCATAGG AATTCTTCTCAAAGCCCTTCAAAGGACATGATGGATTTGATAGGGCACTATGGCTTTTCCAAATGTAGTATTTAGGATTATATTCTTTTGTTGTAAGTTA ACAGTAGCCAAGTATTACATACAATCTGTATCTTCAACTACTTGTCCAAGCTAGGTTTTCAAATTATTCAATTCCTCTAATAGCACTTAAATTTGATTAT TCTGAGTGATAACATGGGTATGATAAAATCAAGCCCTTAGTCTCATTGAATTGAACGACA
• Tissue: pods
• Gene name: LI_gene_180434;
• Additional information: details;

Expression of Ll_transcript_516112

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.4
• PS2: 0.4
• PS3: 0.3
• PW1: 0.5
• PW2: 0.9
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516112

• Blastp: Protein BTR1 from Arabidopsis with 61.2% of identity
• Blastx: Protein BTR1 from Arabidopsis with 63.32% of identity
• Eggnog: Neuro-oncological ventral antigen(ENOG410XRZD)
• Kegg: Link to kegg annotations (AT5G04430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441001.1)
• Pfam: KH domain (PF00013.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;