Id Trinity | TRINITY_DN50854_c0_g3_i18 |
---|---|
Name Transcript | Ll_transcript_514020 |
Sequence | AAATGATTTTTGCAAATAAAATGTAAGAGGAATGTGTGGAATATTAATGGATTATTGATAATTATAAATACTAGCTGGGTTCCATTGAAGATTTGAAGTT AAAGAAGAAGAGAAATGTGTGGAATATTTGCGTATCTGAATTACAAGGTGAAGAGAGAAAGAAGGTACATAATAGAGGTTCTATTCAATGGGTTAAGGCG TTTAGAGTATCGCGGTTATGATTCCGCTGGAATCGCCATCGATTCTTGTTCATTTCCCTCTGTTAATGCCGATCCAAATTCCATTTCCAATTCTTCACAC ACTCCTCCTCCTCTCGTCTTCCGTCAGGAGGGAAACATTGAATCACTCGTTAAGTCCGTTCACCAAGAAGTGGCAGATGTGGAACTGAACTTGGAGGAAT CATTTTTGACACATGCCGGAATAGCGCATACTCGATGGGCGACTCACGGAGAGCCTGCTCCCAGGAACAGTCATCCTCAGTCATCTGGTCCTGGAGATGA TTTCCTTGTTGTTCACAATGGTGTTATCACTAATTATGAGGTTTTGAAGGAAACACTTGTCCGACATGGCTTCATCTTTGAATCTGAAACCGACACAGAA GTCATTCCGAAGCTTGCAAAGTTTGTTTATGACAAAGCAAATGAAGCAGCAGGTAGCTTTTATTGGTAAATGAAGCATTTGCTTTATGTCCATTTAGGCA TTAATGTTTCATATGCTTGTCAAAGTTATGTATAATACTTTTTTTTCTTAAACTGTGATCGGCGCCTGCTCGTTGTAAGTTAAGTTAATGTGCCTTAGAA GGTAATCAGATTTGTTTACTCAACCTTGGCACTCACGTGTGATTGCATTAAATTACTAGAAAAGGTATAGGTCATAACGTTATTAGTTCGTTTCTTTAGT AGTAGATAAGGTTCTTGATAGTCATTCTGAATGGACTTGAGCATGATTGAGTTCATGATAGAGCAGTGCTATATACAACTGAAACAGTTTCACAAAGTAC CTAAGAAAACATGTGGCGCCCTTAATATGAAGCTATATTATAATGAATTGATATTTAAAACAAAAAACTCTAACATGATAATGTTGACATTATTGGTAAA AAAAATTCGTGAATTGATTTCCTGATCATCAGCATATCCCTTCATGATATTCTGGTGATTTAAAATCTTTAAAAATTATGAAGATGAAGGAAAGATGGTG GAATAAGACAAAATTACCATACTAATGCTGCAAGGCAACTTTTCGTAAATCTCTTGAAAAATGATATTCGTGTTTGGTTCCAAATGTGATAAAGCTGCAT GTTTTTAAGTTTAAATTGGTCTGCATTAAGCCCGTAGGTTATGCCAAATATTTGTATTAACACAGAGCACAACTGTTTTCAGTGGTTTATAGCTCAGCTT TCCGTTTCAGTTTTCATAAAGAGCCACTAATGCCATTATAGGCATTGTTAGCTTGAAGTACTTTTCCAATCTTGTTGCAGGTGATCAGATTGTTACCTTT AGTCAAGTTGTCCTGGAAGTTATGAGGCATCTTGAAGGAGCTTATGCCCTTATCTTCAAAAGTCGACATTACCCTAATGAATTGATTGCTTGCAAGCGTG GTAGCCCACTGCTCTTAGGTGTTAAAGAATTGAGAGAAAATCAGGAAAATGGTTCTGCATTTGAGGAAAACAAATTCCTGTCAAAAGATGGACATCCTAA AGAATTGTTTTTGTCCAGTGATGCCCATGCTGTGGTTGAGCATACCAAGAAAGTGCTAGTTGTTGAGGATGGTGAAGTAGTTCATCTCAAGGATGGCGGG GTTTCTATTTTGAAGTTTGAAAATGACAAGGGAGAACATGTAGGTCCTCTTTCCAGAGTTGCCTCAGTGCGACGTGCATTATCTATTCTTGAGATGGAGG TTGAGCAAATAAATAAAGGACATTATGAGCATTATATGCAGAAGGAAATTCATGAGCAGCCAGAGTCTCTAACAACCACAATGAGGGGAAGGCTTATACG TCGAGGATCTAGCAAATCCAAGTCTGTTCTTTTGGGTGGACTGAAAGATCACCTCAAAACAATTAGGCGAAGTAGAAGGATAGTTTTCATTGGATGTGGC ACAAGTTATAATGCTGCTTTGGCAGCTAGGCCCATCTTGGAGGAACTTTCTGGTATTCCTGTAACTATGGAAATTGCTAGTGATCTATTGGATAGACAGG GACCAATATACCGAGAAGATACAGCCGTTTTTGTTAGTCAATCTGGTGAAACTGCAGACACTTTGCTTGCATTGCAATATGCTTTAGAAAATGGTGCATT ATGTGTTGGGATAACAAACACTGTTGGTAGTGCAATAGCAAGAAAAACACATTGTGGTGTTCATATAAATGCTGGTGCTGAGATAGGTGTGGCAAGTACC AAGGCATACACAAGTCAAATAGTTGTGATGGCCATGTTGGCCCTTGCAATAGGAGGGGATACAATTTCCAGTCAAGCTAGAAGAGAAGCAATTGTAGATG GTCTATATGACCTTCCAAATAAAGTCAGAGAGGTTCTAAAGCTTGACCAGGAGATGAAGGATCTGGCACAGATATTAATTGCTGAACAGTCTCTTCTTGT CTTCGGGAGATCATACAACTATGCTACTGCTCTAGAGGGCGCTTTGAAAGTAAAGGAAGTGGCACTGATGCATAGTGAAGGGATACTTGCTGGTGAAATG AAGCATGGCCCTCTGGCATTAGTAGATGAAAATCTTCCGATTGTCGTCATTGCTACACGTGATGCTTGCTTCAGCAAGCAGCAGTCTGTTATACAACAAC TTCATGCCCGCAAAGGCCGCCTCATAGTTATGTGTTCGAATGGGGATGCAGCTTCTGTATGCCCTGGGGAATCTTGCAAGGTGATTGAAGTTCCACAGGT TGAGGACTGTCTTCAACCAGTAATTAATGTAGTTCCATTACAGGTATGTTTAGTAATATTTTTTTACCAATGCAAGATCCTCCAAAAGTTTAAGCCTAAA GATTCTCTTAATACTAAGTAATAACATAAAGTTGGGTGAAAGAGAAGATGCATTCACTGTCTTTGGAGTTCATAGTATTAGGAGGATCTCTTGGCCAAAA TTTGAGGGAATGTATCATTTCTCATTTTTTTAGCCATTTTTGCTGATTATTTTATCCCTACAAGTTGGCTCCAATATTACTACATTCAGTGAAAAGCAAA CATTATTATAGCAGGTCAAACATTCTATTATTTATCTGTTCATAAAGATATTCTACTACTACTCATTATTATTTACAAGTTTTTTTCATTTGATATAAAT TTCAATGTCTTGATTTCACAAATGCATGTTTTCCAGTTCTATCTTGTACCGGTTTCCTGAAATATTATTAAGCTAGCTTCTCCTAATGTATTACTTGACA AAAGAAACTTTGGAATCATATATTATTAAACCTTATTTGTAAGGATAAAACTGCATACATTTACTCTTCTCAGACTCATCAGGTGGGAACCTCGTGCACT TCGACGCCCTTTTATATTACTAAACTGTATTGCTTTTTGTTGCAGTTACTGGCATATCATCTCACTGTCTTGAGGGGATTCAATGTTGACCAGCCTCGAA ATCTTGCTAAGAGTGTAACCACGCAATAAAGAAGAATCGTTGACATCACTTTCTTTTTTGGTTCTTTCAAAAAAAAAATGAAATATAGGCTCTTGAAAAG CTCTTCTTCCTTTGAGAGATGATTGATGAAAACCTTCAATTCTTTGTCTGGACAGTTATCAAGGTGGGCATCAGCACGTTGTATTTTATAGATGGCTCAC TATTTTATCAACATCCCACCTTTCTGAGAAAATAATAGACATCAATAATTTATTTCGAGTGCATTTTTGAGTTGATTTTTAGAGGGTAACGTAGAGAAAG AAAATATTTCAGAGTCATTAAATACATTCATGAGATGATTCTGAAGTATTCACTTTCCCTTTGTTACCCTCCAAATCTCAATTCGGATCTCAATCAGACT CGTTGGGTTCCGAATTGAGTTTTGGAATAGAATGAAAGGAAATGTTTGATAACCGTCATTTTTCTTCTTTCCCTTCTAGATAAACTCGCAAATATACACG TAGGATTTTCACTCTAGTACTATAGTTGATGTAATATATTTACTGGATCCTTTATGTTGGCTGTTTGAGATATGAGATAGTTTTCCATTGGTTTTATAGC ATGTTAAAAAGGTGCACTGGCACACTGGAAAATTTGTATGAAAGCTGGGAACAGTTTTTCTTCATTATGCAATTTTTGTGCTATCAAAGGTATTTCCTCA TTTTTTTTAGTAAAAGAATAATTTTTTTGGGAGTTCATGGTTGTCCCTCTCAACAAATGTTGCTCACAGGAATTAAACAATCAACCTTGGGGATCTGGTA GAGCATTATACCACTAGATTAATGTCTTGTTAGTTGATAGGATTGAAAATATTATCTAACTGTTCCTAGCACAATAGATTGAAGTCCTATTTGTCCTGCT TTGTTATTACTTTAGCTCAGGGTCGAATTAGAAATAAATATAGGCTTAATTTCTATTTGCATTACACTTGAAATGAATACCTATTGGATGTTTGGAGCAA TGATACTCCTGAACTCAATTTTTACTTTCACACTTTTCTAAGTAAAAATTTAGATAACCAAATAAATTATTAGTTTATTAC BLAST |
Tissue | pods |
Gene name | LI_gene_180486; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_514020
Blastp | Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 from Mus with 50.5% of identity |
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Blastx | Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 from Mus with 50.1% of identity |
Eggnog | Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (By similarity)(COG0449) |
Kegg | Link to kegg annotations (14584) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413935.1) |
Pfam | SIS domain (PF01380.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |