| Id Trinity | TRINITY_DN50857_c0_g2_i18 |
|---|---|
| Name Transcript | Ll_transcript_516490 |
| Sequence | GAAAAGAAAAGTGAAACCTTTTCTCTCTCTCTTGAAAAATCTGACAGGATCGTACTCATACACACTCTTAAAATAATTGCAGTTTGTGTTCTCATTGATT GGAAGCTGTAAGAGAGAGAGAAAGAGAAAGGGGTAAAAGCAACAGTAGTAGTAGACTAGTAGAAGAAGAACATAGCATAGCGTGGCCACTAAGTAGTTAA GTATCAACCATAACACCATAAACTACAACAACAACTAGAACAAAGTACATACAATACCATAGCTACTGCAAAAATTTCATCTTTTTCCAACCCCATTTCT TATCTTTTCTGGGTTTTTCTGCATTCTTTGAGATCCCTTCTCTTCTGGCTGTTCATTCATTGCTCCTTCAGATCTGTTTGCTTTTCAAGTTTATTCCTTT ATTTAGCTTACTGAAAAGCAGAAGCTGCATATCTTTTGTTACTTGGTGTTGTTGGGTTCTGAAAGAATAGATATTGTAGCATGAAGTGTTCAGTTCAAAA TTGGAACTTGGGGTGTTGGGGGTTAAGTGGAGTAAAAGCTAATGAGGCATAAAGCTATTGTCTTATGTAGTGATACTGGTTTTGGTTGAGAATTGAAGGG TGGGTATTGTTTAGATTTGAAGGTTTTTTTTTGGTGAATGGGATTAGGGGACATATAACAAGGATTATATTCTTCTGTTGAAAAGGATCGTGGTTGTCAT TTTCCCAAAATTTTGTTGCTTACTTAGTCTACTGAAGAAGATTGCTTTGGAATCATTGATTGTGGTTTCAATTTTGAGACTTTTCTTTTTTTGTTCAAAT GAGACTTTCTTCAGCTGGTTTTAGTCCTCCACCCCTGGAAGGGGAAAAGAGATGTCTAGATTCAGAACTTTGGCATGCATGTGCTGGTCCTCTTGTTTCA TTGCCGGCAGTTGGAAGCCGTGTGTTTTACTTTCCACAAGGTCATAGTGAACAAGTGGCAGTGTCAACCAACAAGGAAGTGGATGCCCATATCCCCAACT ATCCAAGCTTACCACCTCAGCTTATTTGTCAGCTCCATAATCTGACTATGCATGCGGATGCTGAGACTGATGAAGTCTATGCACAGATGACCTTGCAACC TTTGAATCCTCAAGAGCAAAAGGAAGCGTACCTTCCAGCAGAGTTGGGCACTCAGAGTAAACAGCCAACAAACTACTTCTGCAAAACTTTGACGGCCAGT GACACAAGCACTCATGGAGGATTCTCTGTTCCTCGTCGGGCTGCTGAAAAAGTCTTTCCTCCATTGGACTTCTCTCAACAGCCTCCCTGCCAAGAGTTAA TTGCAAGGGATTTGCATGGTATTGAATGGAAATTCAGACATATCTTCCGGGGCCAGCCCAAAAGACATCTTCTTACAACTGGATGGAGTGTCTTTGTGAG TGCGAAAAGACTTGTTGCTGGTGATGCTGTGCTGTTTATCTGGTAAGTAAATTTAATTTTTCCTGCTCACGAAAGGGTCATCCCATTATTTTTGGGACTG ATGATTGTATTTTACTCCACTCTATCAGTTTTCTCGTAATTTTGTATGAAATTTTTCCTTTGCCATCTATGTGACTGATTTGACTTGTCTCCATGCGACT TGCATGTCATTTGGGATATTCAGAAGAATATGAAGAAACATTCTTCTTTGATGTGTGGCTCAGGCTTTCAGATTTGTGGATGATTCTTATTTCTCTTATG TTGAGCACTGCTAAACTTTGTTAGTTCATGTTATATCTTATCAATGGTGTAACTCTAGTGTATTTTCTTCGATAGGAATGAGAAGAACCAATTGCTTCTT GGCATTCGGCGGGCAAATCGACCACAAACTGTGATGCCTTCATCAGTTTTGTCAAGTGACAGCATGCACTTGGGGCTTCTTGCTGCAGCAGCTCATGCAG CTGCAACAAATAGTCGTTTCACCATCTTCTATAACCCACGTGCTTGCCCATCAGAATTTGTCATACCCTTAGCAAAGTATGTTAAAGCTGTGTATCACAC TCGAGTCTCTGTTGGTATGCGCTTCAGGATGCTATTTGAAACAGAGGAGTCAAGTGTGAGGCGATACATGGGAACAATAACTGGCATTAGTGACATGGAT CCTGTTCGGTGGCCGAATTCATATTGGCGCTCAGTGAAGGTTGGCTGGGATGAATCCACTGCAGGAGATAGGCAACCTAGAGTGTCTCTTTGGGAAATTG AGCCATTAACAACATTTCCCATGTATCCATCGCCATTCCCGCTTCGGCTTAAACGACCATGGCCTCCGGGGCTGCCTTCATTTCATGGCATGAAGGATGA AGATTTTGGAATGAATTCTCCGCTGCTGTGGCTTCGAGACCCTGATAGAGGGCTTCAGTCTATTAACTTTCAGGGGATGGGGGTTAATCCTTGGATGCAG CAAAGGTTTGATCCGTCCATGCTGAACATGCAAACAGATATGTATCAAGCTGTGTCTGCCACTGCTCTTCCGGATATGAGGACTTTAGATCCTTCCAAAC AGCATTCTTCTTCCTTAGTTCAATTTCAGCAACCACAGAACTTCCCGAACAGGACTGCTGCTTTAATGCAGGCCCAGATGTTGCAGCAGTCACAGTCGCA GCAGGCTTTTCAGAATAATCAAGAGAATCAGCAGTCATCTCAATCTCAGGCACAAACTCAGATGCAGCAGCTGCAGCACCAACACTCATTCAATAGTCAG CATCAGCTTCATCACAACCAACAACCACAACAAATGCAGCAGCAACAACAGCAGCAACCACAACAAATGGTAGATAATCAGCAGATTTCTAATGCAGTCT CTACAATGTCTCAGTTTATTTCGGCACCTCAATCTCAATCACCACTGATGCAAGCTATCTCTTCACTGTCCCAACAACAAACGTTTTCTGATTCTAGTGC GAACCCTACCACTATTGTTTCTCCCCTGCACAATATCTTGGGTTCGTTTGCCCTGGATGAAAATTCCCACCTTCTGAACCTTCCTAGAACAAGCTCTTGG ATTCCGGTTCAGACTTCAACTGCATGGCCACCTGCCAAGCGTGTTGCAGTGGATTCTCTCCTTTCTTCCGGGGCATCTCAATGTGCTATGCTACAGGCAG ATCAGTTAGGGCAGCCACAGAGTACCATGTCAAAAAATGCTATTACATTACCCCCTTTTCCTGGTAGAGAGTGCTCAATAGATCAAGAAGGGAACAATGA TCCTCAAAATAATCTTTTATTTGGTGTTAATATAGAGCCCTCATCACTTCTAGTTCAAAATGGGATGGCAGGCCTTAAGGGAGTCGTCGGCAACAGTGAC TCCCCAGCCATGCCATTTCAGTCTTCTAATTTCATGAATAACACAGACATTGACTCTTCATTGAATCATGGAATGACACGTAGCATTGGTGATTCAGGCT TCCTGCATACCCAAGAAAATGCAGGGCAAGAAAATTCACCAAACAAGACCTTTGTCAAGGTTTATAAGTCAGGGTCCTTCGGAAGATCATTAGATATCAC TAAATTCAGCAGCTACCACGAACTGCGTAGTGAGCTTGCTCGAATGTTTGGTCTTGAAGGTGAGCTGGAGGACCCTCTGAGATCAGGCTGGCAGCTTGTA TTTGTTGACCGAGAGAATGACGTTCTTCTCCTTGGTGATGGCCCTTGGCCGTAAGTGTCCCACTGCCCATGCTTTCTTCTTTTTGCTTTTTCTCCTACTC ACCCTTTTAAATGCAAAACTGAAAACTAGAGAAACTTATTCACTTGGATTTTCAACAATATGGTTCTTTAATATACAACTAACATGTTATCTTCAGAAAT AATGATGGAATTGCATATACTTTGCTTTTTGACCTTCCATATATGTTGTGGATTTAAGGTCCTTATTTTCTCTACATCTTTCTCACGTGCATGATCTTTC TTATGTCAGGGAGTTCGTAAATAGTGTGTGGTGTATCAAGATACTTTCGCCTCAAGAAGTGCAGCAGATGGGCAACACCGGCCTTGAGCTTCTGAACTCT GTTCCAATTCAAAGGCTCTCTAATGGCATCTATGATGACTACATGAGCCGTCAGGACCCGAGAAGTCTAAGCACTGGAATAATAAGTGTGGGATCATTAG AATACTAAATGATGTGACTGTCAATACTATGACACTTCTATCTCTTGTAATATTACCCTTGCTTCTCAACCTTTTGTCCATGGTGGGAAGTGCTGCCTAA ATTTAGTTCTATAGTCCTACTCTTTAGCCTTTTTGTTTTCCTGTTTTTCCTGCTAGGATTATTCATAAATATGATACTGTAACTATATGGCATCTTGTTA TTGTGCTAGCTACAATATATACCATACTTAATCCGTTAGGAAATCAATGTGTGAAGATAGTTCCTTCTTAAAGTTACATAACTTCATTTCTAATCTTGCT TTGGCTCAAATGGTTGTGTTGCTTGACTTGACTTAGTATTTTGGACGATGGTAGAATCTCTCTTTTTCTAGAAAATATGGTAAAATGTTGGTTTGAGCAT CTTTTAAGGAGACCATTGAGGTCCTTTGTTGGGAGAGTAGATCAATGGAGGTTACTCCATTCCTTAGAGGTAGAGGGGTGATAGAGTGTTATGACATTAT TAATTTATATGAGTCAGAACTATATTGTTATTGTATGTCTTATGGTAGACATTGGATGTGATATTTAAGTTTTTGACCTTAATGATTTGGCTGCTTTGCA TTTTAGCATTGCAGGCACCATGCACCATCTAATTTTGCCTATTATAATCAATTTTTTGTAGTATGGAAAGAAAGAAGAATACGCAAATTATGATATTCTC CTCAGAACTCATAGGAACCACCACTTTTCGATGGTCACCCCCACCTCATGGATAATTGTCTCTACCCTTGACTACACGCCCAAGTCAATATAGTACCAAG CCACCATGAGCTACTATGTTCTGGACCAAATCATGGATTATTGGCTGAAATGGTGGCCTTGGTTGCACATCCGGAATAAGGATGTTTTGAACTGGCTAAG ATATGACAGATTCGAAGGTGAAGCTCAGAGATGCAAGCAGCGGTCAATCTTAACGGTTGTAGGTTGTAGATTTCAATTATGATTGAAGCTTATCGCCGCA AAGCTTTTAGCAGTAATAGCGGTTGACAATGGTGAGTCTCGGTACAACGATATTATTACCTTGTGATGTGAGGTTATGTTTTCAACAAATAGATTGGGAA CATAACCCCATATCACAAAATTAGAGATGTGTTGGATGATGGTGCATTCCTAGTGGTTGGGTTGGGGTTAGATGAGTAAAGGTGAACATAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_180514; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_516490
| Blastp | Auxin response factor 6 from Oryza sativa with 56.45% of identity |
|---|---|
| Blastx | Auxin response factor 6 from Arabidopsis with 81.44% of identity |
| Eggnog | auxin response factor(ENOG410YA3R) |
| Kegg | Link to kegg annotations (4328406) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419302.1) |
| Pfam | Auxin response factor (PF06507.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |