Ll_transcript_515244

• Id Trinity: TRINITY_DN50859_c1_g3_i4
• Name Transcript: Ll_transcript_515244
• Sequence: TAGATTTAAACTTTTCCCCAATTCTTGAAAACGGGTCCCGACCCGATTTCTCAACTGTGATCCCTAATTTAGCGATCAAAACTACTATCCTCAATTGGTG CAACAAGTCCCACACCGAGCACCCGCATGCACCGGATTATGCTTCTTTGGAGAGCCTTGTCCGTGAAAAGATGGCGGCGGAGGCGCCGCAGGTGGAAGAA CGAATTAGGGTTTCTGAGAAGGAGCTTTTGAACGCTGTAGCGGAAAATCCGCAGGTGAATTTCTCTCACGCTGCAACTGAGTTAGGTACCCGAATCAACC ACTTCGATTCTGGATCCTCTGTGGAATCGGTGATCATTGGAAAGCCATGGCACGCCGTTACCTTTCACGATTCGACCTACGTGCTTGTCTTCCAATTCTT CCTCATCAATTGAAATCAGTGAGATCGAAATTCTAAAACCTAGCGGCGAAGTCACCGAAGAGGAGGAGAAATTGTTAACGAAATTGACAAGCAGCGAGGT TTTCGAGCAAGAAGAAGGTGTGATTTCACTGAGAAGCATCACGAGGAACAACGAAGAAGCTCGGTTTTCTTTTTGCACGCAACGATTGCTTTTTGTACTG CGTTTGTTAATTCAATCGCGATACACCGTCGTTCAGGTCAACGCATTTGCTTCGTTAGTCAACCTTTCTCTCGAGAAGCGAAACAAGGTGAAGATCGTGC GGTCAGGATTTGTTCCATTACTCATCGACGCTTTAAAGGCCGGATCCTCTGAAACGCAGGAACACGCTGCGGGTGCACTCTTCAGTTTAGTGTTAGATGA TGATAACAAAATGGCAATTGGTGTTCTGGGCGCGTTGCAGCCACTAATGTACGCACTGAGATTGGATTCCGAGCGAACTAGTCATGACTCAGCACTCGCA TTGTACCATTTGACTCTTGTACAAACCAACCGAGTCAAGCTTATTAAACTCGCAGCAATCCCCGCTCTTCTCTCATTGGTGAAATCGAATACAAGGGATT TGGCAAGTCGTGTGTTGTTAATTCTGTGTAACCTTGCGGCGTGTGTTGAGGGACAAACGGCGATGCTGGACGCCAACGCGGTGGAGTGTTTGGTGGGTTT GCTGAGGGAAAACGAGTTGAACTCGGAGTCAACTCGGGAGAATTGCGTGGCGGCGTTGTCCGTGCTGAGTCTTCGGAGTTTGAGGTTTAAAGGGTTGGCG AAGGAGGCGGGGGCGGTGGAAGTGTTGAAGGAGATTGAGAAAACAGGAACGGAGAGGGCGAGAGAGAAGGCTAAGAGGATGTTGGAGATGATGAAAGCCT TTGGAGAAGAAGAGGGGATTCTGGAATCGGGCGGGTTGGCTCGGACTTGGAACCGAGTTGGCGGTGGGGCAACTACATTTTAATTTCTCTTTTTTTGAAG TTTATATTTGTGGGAAAAAGGATAATTAGTACTGGTGAAGTGTCTTAGTGAAAGGGTGAGGGGTTGAAGTGGTGATTCATCTGAATTGGGAGTAGCTAAT TTATGTTGTTATTGGGATTGTGGATTTAGCTTGTAGATCATGGAGGCTAAAAAGTGATGTCTTATGACCTTATCAATGGTTTCAAGTCTTCGAATACAAT TGAAGCTTGAAGGTATTAGACTAATAGGAGTTTGAAATGGCAAGACTTCCAATCACTTGCACTAACAATGAATCATCATCGAAAATAAGATAACTATTAT TGTAAATATAGTTGAAAATAAGATACATGGTTCTTCTACAAACTAAATTTGTGTTATGGTTAAAGCTCTAATTGAATGATTATATGGTGCCCATATAGTT ACCTACACCCAGTTTTTTGTGTCTTCTGTTGTAGATTAGCATTACTGTTTTACATTTGCTGTAATTATTTTTACCTAATATGATATCACTACAATCCAAG
• Tissue: pods
• Gene name: LI_gene_180529;
• Additional information: details;

Expression of Ll_transcript_515244

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.2
• PS2: 0
• PS3: 0.2
• PW1: 0.2
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_515244

• Blastp: U-box domain-containing protein 38 from Arabidopsis with 59.51% of identity
• Blastx: U-box domain-containing protein 38 from Arabidopsis with 60.67% of identity
• Eggnog: ubiquitin-protein ligase activity(ENOG4111IM2)
• Kegg: Link to kegg annotations (AT5G65200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431702.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;