Ll_transcript_515246

• Id Trinity: TRINITY_DN50859_c1_g3_i5
• Name Transcript: Ll_transcript_515246
• Sequence: TAGATTTAAACTTTTCCCCAATTCTTGAAAACGGGTCCCGACCCGATTTCTCAACTGTGATCCCTAATTTAGCGATCAAAACTACTATCCTCAATTGGTG CAACAAGTCCCACACCGAGCACCCGCATGCACCGGATTATGCTTCTTTGGAGAGCCTTGTCCGTGAAAAGATGGCGGCGGAGGCGCCGCAGGTGGAAGAA CGAATTAGGGTTTCTGAGAAGGAGCTTTTGAACGCTGTAGCGGAAAATCCGCAGGTGAATTTCTCTCACGCTGCAACTGAGTTAGGTACCCGAATCAACC ACTTCGATTCTGGATCCTCTGTGGAATCGGTGATCATTGGAGAAAGCCATGGCACGCCGTTACCTTTCACGATTCGACCTACGTGCTTGTCTTCCAATTC TTCCTCATCAATTGAAATCAGTGAGATCGAAATTCTAAAACCTAGCGGCGAAGTCACCGAAGAGGAGGAGAAATTGTTAACGAAATTGACAAGCAGCGAG GTTTTCGAGCAAGAAGAAGGTGTGATTTCACTGAGAAGCATCACGAGGAACAACGAAGAAGCTCGGTTTTCTTTTTGCACGCAACGATTGCTTTTTGTAC TGCGTTTGTTAATTCAATCGCGATACACCGTCGTTCAGGTCAACGCATTTGCTTCGTTAGTCAACCTTTCTCTCGAGAAGCGAAACAAGGTGAAGATCGT GCGGTCAGGATTTGTTCCATTACTCATCGACGCTTTAAAGGCCGGATCCTCTGAAACGCAGGAACACGCTGCGGGTGCACTCTTCAGTTTAGTGTTAGAT GATGATAACAAAATGGCAATTGGTGTTCTGGGCGCGTTGCAGCCACTAATGTACGCACTGAGATTGGATTCCGAGCGAACTAGTCATGACTCAGCACTCG CATTGTACCATTTGACTCTTGTACAAACCAACCGAGTCAAGCTTATTAAACTCGCAGCAATCCCCGCTCTTCTCTCATTGGTGAAATCGAATACAAGGGA TTTGGCAAGTCGTGTGTTGTTAATTCTGTGTAACCTTGCGGCGTGTGTTGAGGGACAAACGGCGATGCTGGACGCCAACGCGGTGGAGTGTTTGGTGGGT TTGCTGAGGGAAAACGAGTTGAACTCGGAGTCAACTCGGGAGAATTGCGTGGCGGCGTTGTCCGTGCTGAGTCTTCGGAGTTTGAGGTTTAAAGGGTTGG CGAAGGAGGCGGGGGCGGTGGAAGTGTTGAAGGAGATTGAGAAAACAGGAACGGAGAGGGCGAGAGAGAAGGCTAAGAGGATGTTGGAGATGATGAAAGC CTTTGGAGAAGAAGAGGGGATTCTGGAATCGGGCGGGTTGGCTCGGACTTGGAACCGAGTTGGCGGTGGGGCAACTACATTTTAATTTCTCTTTTTTTGA AGTTTATATTTGTGGGAAAAAGGATAATTAGTACTGGTGAAGTGTCTTAGTGAAAGGGTGAGGGGTTGAAGTGGTGATTCATCTGAATTGGGAGTAGCTA ATTTATGTTGTTATTGGGATTGTGGATTTAGCTTGTAGATCATGGAGGTAATCATTATGCTTTATACATTTATTCATTTATTTATTTAAGCTTATCGGAG TGGTTTAGCATACATGTAGGAAACAACTTACATTATGTTTTTAGACATATTTTATCATCTGTGAAACTATCAATTTTTATAATGTATTTATGTTTGAGGA CCTCACATGAAAATTAAATTTAACTTAGTTTAAGGAAGTAAAATGATTATCTTGTTTTATACTAAATAGTATAGTGTGAAGTTATTTGTTTATATTATGA TTATTT
• Tissue: pods
• Gene name: LI_gene_180529;
• Additional information: details;

Expression of Ll_transcript_515246

FPKM

• PAB: 5.9
• PNAB: 2.6
• PS1: 3.7
• PS2: 0.8
• PS3: 1.3
• PW1: 1.7
• PW2: 0.8
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_515246

• Blastp: U-box domain-containing protein 38 from Arabidopsis with 55.05% of identity
• Blastx: U-box domain-containing protein 38 from Arabidopsis with 56.47% of identity
• Eggnog: ubiquitin-protein ligase activity(ENOG4111IM2)
• Kegg: Link to kegg annotations (AT5G65200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431702.1)
• Pfam: Armadillo/beta-catenin-like repeat (PF00514.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;