| Id Trinity | TRINITY_DN50862_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_515356 |
| Sequence | TTCCGCGTGCAGTCTTCGTAGATCTTGAGCCAACAGTTATCGATGAGGTCAGGACTGGTACTTATCGCCAGCTTTTCCACCCAGAGCAGCTTATCAGCGG TAAAGAAGATGCTGCCAACAACTTTGCCCGTGGCCATTATACCAGTAAGCACAATATAACAGATTATTTGATCTCGCACGATTTTTAACTAATCTTGTTA TTTATATGGTTCTGATGTTGCTTGTTCTGTTCAGTTGGGAAAGAGATCGTTGATCTGTGCTTGGACCGCATTAGGAAGCTTGCTGATAACTGCACTGGTC TCCAAGGTTTCTTGGTTTTCAATGCTGTTGGTGGAGGAACTGGTTCTGGTCTCGGTTCTCTTCTGTTGGAGCGTTTGTCTGTTGATTATGGAAAGAAATC AAAGCTTGGGTTCACTGTTTACCCTTCTCCTCAGGTTTCAACTTCTGTTGTTGAGCCATACAACAGTGTCCTCTCTACCCACTCCCTCCTAGAGCACACT GATGTATCTATTCTGTTGGACAATGAAGCTATCTATGACATTTGTAGGCGCTCTCTTGACATTGAGCGTCCCACATACACCAACCTCAACCGTCTTGTTT CTCAGGTGATTTCTTCATTGACTGCTTCACTGAGGTTTGATGGTGCCCTCAATGTGGATGTGACTGAATTCCAGACCAACTTGGTCCCATATCCTAGAAT CCACTTTATGCTTTCTTCCTACGCACCAGTCATCTCTGCTGAAAAGGCTTACCATGAACAACTCTCAGTTGCTGAAATCACCAACAGTGCTTTTGAGCCT TCATCTATGATGGCCAAGTGTGATCCTCGCCATGGAAAGTACATGGCATGTTGTCTGATGTATCGTGGTGATGTCGTCCCCAAAGATGTTAATGCTGCTG TTGGCACCATAAAGACCAAGCGCACCATTCAATTCGTTGATTGGTGTCCTACTGGTTTCAAGTGTGGTATTAACTACCAACCACCTACTGTTGTTCCTGG TGGTGACCTTGCCAAGGTGCAGAGGGCAGTGTGCATGATTTCAAACTCAACCAGTGTGGCTGAGGTGTTTTCTCGCATTGACCACAAGTTTGATCTCATG TATGCCAAGCGTGCTTTTGTCCACTGGTATGTGGGTGAGGGTATGGAAGAAGGTGAGTTTTCTGAAGCTCGTGAGGATCTTGCTGCCCTTGAGAAGGATT ATGAAGAAGTTGGTGCTGAGTCTGCTGAAGGTGGTGATGATGACATTGAAGACTACTAGAGTCTGTCAGATTCTTGTGCTCTTTTGTTTCTTGTATCGCT TTTTCTCTATTAAGTGCCCTGTTCAGATTCTACCAGAACTACGCTGTTGTGGTTTGTTTGTATGCACTGTTTTGATGCTCCCTCCTTGTTTCTGAAATAC TGATGATGACATCTTGATAAATTATCTTTTGTTTCGTATTTTCTGTGAAAATATTTTTAAGGTTAAACAAAATAATACGTATGTCATATACGTTTACTAG TCAATAACATACGTAGTATGAGAATATATACTATTCTTTATGTTTTTGTGTGGCTGTTGTATGACTACTTTTTCCAAAAATTTAAGTTGAACTTTTTAGA TTTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_180544; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_515356
| Blastp | Tubulin alpha chain from Prunus with 97.27% of identity |
|---|---|
| Blastx | Tubulin alpha chain from Prunus with 90.91% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427961.1) |
| Pfam | Tubulin C-terminal domain (PF03953.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |