Ll_transcript_515361

• Id Trinity: TRINITY_DN50862_c0_g1_i4
• Name Transcript: Ll_transcript_515361
• Sequence: TTCCGCGTGCAGTCTTCGTAGATCTTGAGCCAACAGTTATCGATGAGGTCAGGACTGGTACTTATCGCCAGCTTTTCCACCCAGAGCAGCTTATCAGCGG TAAAGAAGATGCTGCCAACAACTTTGCCCGTGGCCATTATACCATTGGGAAAGAGATCGTTGATCTGTGCTTGGACCGCATTAGGAAGCTTGCTGATAAC TGCACTGGTCTCCAAGGTTTCTTGGTTTTCAATGCTGTTGGTGGAGGAACTGGTTCTGGTCTCGGTTCTCTTCTGTTGGAGCGTTTGTCTGTTGATTATG GAAAGAAATCAAAGCTTGGGTTCACTGTTTACCCTTCTCCTCAGGTTTCAACTTCTGTTGTTGAGCCATACAACAGTGTCCTCTCTACCCACTCCCTCCT AGAGCACACTGATGTATCTATTCTGTTGGACAATGAAGCTATCTATGACATTTGTAGGCGCTCTCTTGACATTGAGCGTCCCACATACACCAACCTCAAC CGTCTTGTTTCTCAGGTAACCTTTCATTGAATAGGTTCACTGATTTTTCATAATTCTGATTATGCATTCTGTTATTAATAATAGCATCTTGATTTTAATA ATAAAATTATCAATCTTATATTTGTGATTAAGTCAAAGATGACGGTTTTACTGAATGTGTTGTAAAAGTCAAACCAAGGCTTGGTTGTATCATTTTGATG TACACTATGATGTATTGATGTTTATATTTGTTTGGGTTTCAGGTGATTTCTTCATTGACTGCTTCACTGAGGTTTGATGGTGCCCTCAATGTGGATGTGA CTGAATTCCAGACCAACTTGGTCCCATATCCTAGAATCCACTTTATGCTTTCTTCCTACGCACCAGTCATCTCTGCTGAAAAGGCTTACCATGAACAACT CTCAGTTGCTGAAATCACCAACAGTGCTTTTGAGCCTTCATCTATGATGGCCAAGTGTGATCCTCGCCATGGAAAGTACATGGCATGTTGTCTGATGTAC CGTGGTGATGTTGTCCCAAAGGATGTCAATGCTGCTGTCGGCACCATCAAGACGAAGCGAACCATTCAGTTTGTTGATTGGTGCCCTACTGGATTCAAGT GTGGTATTAACTATCAGCCACCAACTGTTGTTCCCGGAGGTGATCTTGCCAAGGTGCAGAGAGCAGTTTGCATGATTTCCAACTCCACCAGTGTGGCCGA GGTGTTCTCTCGCATTGACCACAAGTTTGATCTCATGTATGCCAAGCGTGCTTTTGTTCACTGGTATGTGGGTGAGGGTATGGAAGAAGGTGAATTCTCT GAGGCTCGTGAGGATCTTGCTGCCCTTGAGAAGGATTACGAAGAAGTGGGTGCTGAGTCTGCTGAGGGTGGTGATGATGATATTGAAGACTACTAGATGG AGTCTATTACCGATTCTGGTGGCCTTTGTATTTCTTTTATTACCTTTATATGTTGTGTTTGTTTCTTCAGATTCTACCAGAACTGAATTTGTGGCTTGTT GTTGTTTTGGATGGCATTGTTTTGATGCCGTGTCCTTGTTTCTGAAATATTGATGATAACATCCATATATTATCCTTATTGCTTGTGCCAGTGTGATTAT GCAGTGTTTTTGTTTCAGTGTTAAGCTCCCATTTTTTCTTTCGCAGAAGAATATAATCTTGGCTTATAATCTTGGATCTGAATAAAGATTAGTTACTTAA CAAAATTAGACAATTTTGATTTTTCC
• Tissue: pods
• Gene name: LI_gene_180544;
• Additional information: details;

Expression of Ll_transcript_515361

FPKM

• PAB: 0
• PNAB: 1
• PS1: 0.4
• PS2: 0.6
• PS3: 0
• PW1: 2
• PW2: 2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_515361

• Blastp: Tubulin alpha chain from Prunus with 97.27% of identity
• Blastx: Tubulin alpha chain from Prunus with 97.71% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427961.1)
• Pfam: Tubulin C-terminal domain (PF03953.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;